C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001K0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000070447-ENSDARG00000091349 CGP 7955 17:48279058-48358046
GeneTranscriptPositionBiotype
ENSDARG00000070447 (slc39a9)
solute carrier family 39 (zinc transporter), member 9 		ENSDART00000103397 (slc39a9-001) 48279058-48309292 protein_coding
ENSDARG00000091349 (plekhd1)
pleckstrin homology domain containing, family D (with coiled-coil domains) member 1 		ENSDART00000125738 (plekhd1-201) 48323705-48358046 protein_coding
ENSDART00000156430 (plekhd1-002) 48326352-48340458 retained_intron
ENSDART00000156923 (plekhd1-001) 48323671-48352414 protein_coding
CIL_0001K0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000029364-ENSG00000175985 CGP 9606 14:69398015-69531551
GeneTranscriptPositionBiotype
ENSG00000029364 (SLC39A9)
solute carrier family 39, member 9 		ENST00000031146 (SLC39A9-013) 69398692-69462381 protein_coding
ENST00000336643 (SLC39A9-009) 69398692-69460551 protein_coding
ENST00000538956 (SLC39A9-008) 69398390-69458827 retained_intron
ENST00000554023 (SLC39A9-012) 69454701-69458543 retained_intron
ENST00000554059 (SLC39A9-001) 69398708-69429457 retained_intron
ENST00000555245 (SLC39A9-003) 69398386-69459078 processed_transcript
ENST00000555840 (SLC39A9-005) 69398738-69462381 nonsense_mediated_decay
ENST00000556125 (SLC39A9-002) 69398015-69453300 processed_transcript
ENST00000556605 (SLC39A9-004) 69398690-69462388 protein_coding
ENST00000557046 (SLC39A9-010) 69399370-69458593 protein_coding
ENSG00000100632 (ERH)
enhancer of rudimentary homolog (Drosophila) 		ENST00000216520 (ERH-002) 69380135-69398271 processed_transcript
ENST00000555373 (ERH-003) 69386655-69398299 protein_coding
ENST00000557016 (ERH-001) 69380123-69398627 protein_coding
ENST00000557697 (ERH-004) 69380576-69394926 processed_transcript
ENSG00000175985 (PLEKHD1)
pleckstrin homology domain containing, family D (with coiled-coil domains) member 1 		ENST00000322564 (PLEKHD1-002) 69484754-69531551 protein_coding
ENST00000556123 (PLEKHD1-001) 69484692-69503690 retained_intron
CIL_0001K0_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048833-ENSMUSG00000066438 CGP 10090 12:80644215-80724214
GeneTranscriptPositionBiotype
ENSMUSG00000021131 (Erh)
enhancer of rudimentary homolog (Drosophila) 		ENSMUST00000021559 (Erh-001) 80634022-80644341 protein_coding
ENSMUST00000166931 (Erh-002) 80634357-80643832 protein_coding
ENSMUSG00000044062 (Plekhd1os)
pleckstrin homology domain containing, family D (with coiled-coil domains) member 1, opposite strand 		ENSMUST00000153297 (Plekhd1os-001) 80686370-80692466 antisense
ENSMUSG00000048833 (Slc39a9)
solute carrier family 39 (zinc transporter), member 9 		ENSMUST00000085245 (Slc39a9-201) 80644215-80683341 protein_coding
ENSMUSG00000066438 (Plekhd1)
pleckstrin homology domain containing, family D (with coiled-coil domains) member 1 		ENSMUST00000140770 (Plekhd1-001) 80692591-80724214 protein_coding
ENSMUST00000142760 (Plekhd1-004) 80720757-80722007 nonsense_mediated_decay
ENSMUST00000152465 (Plekhd1-003) 80706846-80720684 processed_transcript
ENSMUST00000153762 (Plekhd1-002) 80721732-80722910 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001K0_0001ENSDARG00000070447ENSDART00000103397ENSDARG00000091349ENSDART00000125738ENSDART00000156430ENSDART00000156923CIL_0001K0_0002ENSG00000029364ENST00000031146ENST00000336643ENST00000538956ENST00000554023ENST00000554059ENST00000555245ENST00000555840ENST00000556125ENST00000556605ENST00000557046ENSG00000100632ENST00000216520ENST00000555373ENST00000557016ENST00000557697ENSG00000175985ENST00000322564ENST00000556123CIL_0001K0_0003ENSMUSG00000021131ENSMUST00000021559ENSMUST00000166931ENSMUSG00000044062ENSMUST00000153297ENSMUSG00000048833ENSMUST00000085245ENSMUSG00000066438ENSMUST00000140770ENSMUST00000142760ENSMUST00000152465ENSMUST00000153762
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001K0_0001ENSDARG00000070447ENSDART00000103397ENSDARG00000091349ENSDART00000125738ENSDART00000156923CIL_0001K0_0002ENSG00000029364ENST00000031146ENST00000336643ENST00000554059ENST00000556605ENSG00000100632ENST00000216520ENST00000557016ENSG00000175985ENST00000322564ENST00000556123CIL_0001K0_0003ENSMUSG00000021131ENSMUST00000021559ENSMUST00000166931ENSMUSG00000044062ENSMUST00000153297ENSMUSG00000048833ENSMUST00000085245ENSMUSG00000066438ENSMUST00000140770ENSMUST00000142760ENSMUST00000152465ENSMUST00000153762
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000070447 ENSDART00000103397 N/A N/A N/A 6.608±3.51 N/A N/A 2.543±1.31 5.966±2.81 4.315±0.00 N/A 2.527±0.00 N/A N/A N/A
ENSDARG00000091349 ENSDART00000125738 N/A N/A N/A 0.311±0.13 N/A N/A 0.126±0.00 1.890±0.00 N/A N/A 0.050±0.00 N/A N/A N/A
ENSDART00000156430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156923 N/A N/A N/A 0.474±0.00 N/A N/A 0.046±0.00 N/A 0.036±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000029364 ENST00000031146 4.158±0.00 N/A 4.085±0.00 4.596±0.15 2.416±0.00 3.880±1.48 1.853±0.00 N/A N/A 2.606±0.31 1.828±0.00 3.602±1.09 9.536±0.00 3.948±0.00
ENST00000336643 N/A N/A 3.331±0.00 2.559±0.00 N/A 10.634±0.00 2.283±0.00 8.154±0.00 4.404±0.00 6.222±0.00 N/A 4.960±0.00 N/A N/A
ENST00000538956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554059 N/A N/A 20.697±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 4.734±0.00 N/A N/A
ENST00000555245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556605 N/A 7.519±0.00 14.701±0.00 9.203±0.00 8.892±0.00 12.606±0.00 N/A 10.741±0.00 10.427±0.00 N/A 2.997±0.00 10.764±0.00 N/A N/A
ENST00000557046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100632 ENST00000216520 28.294±0.00 43.918±0.00 N/A 34.247±0.00 27.380±0.00 31.194±0.00 22.410±0.00 41.843±0.00 46.488±0.00 40.101±0.00 25.397±0.00 53.325±12.30 58.910±12.60 48.057±3.95
ENST00000555373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557016 22.896±0.00 26.770±0.00 N/A 20.935±5.53 14.569±0.07 22.943±0.00 8.435±0.84 14.295±2.07 9.374±0.00 11.003±0.63 7.070±1.16 37.820±31.60 22.631±6.71 24.769±11.13
ENST00000557697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175985 ENST00000322564 0.081±0.00 0.105±0.00 0.108±0.00 0.254±0.12 0.050±0.03 0.020±0.00 0.043±0.00 0.438±0.00 0.047±0.00 0.110±0.02 0.049±0.00 0.029±0.00 0.017±0.00 0.426±0.36
ENST00000556123 0.137±0.00 0.250±0.00 0.083±0.00 N/A N/A 0.053±0.04 0.043±0.00 N/A 0.013±0.00 0.178±0.00 0.057±0.00 0.014±0.00 N/A 0.107±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021131 ENSMUST00000021559 15.689±4.29 N/A 47.299±4.71 51.029±31.27 N/A N/A 7.713±0.57 12.724±0.14 75.105±25.95 N/A 10.340±3.49 25.097±10.96 48.279±23.07 16.813±2.84
ENSMUST00000166931 N/A N/A N/A 60.166±0.00 N/A N/A N/A N/A 69.912±34.11 N/A N/A N/A 54.280±11.49 N/A
ENSMUSG00000044062 ENSMUST00000153297 0.197±0.02 N/A 0.931±0.39 0.079±0.04 0.199±0.07 1.124±0.20 0.034±0.00 1.117±0.19 0.308±0.46 1.410±0.62 N/A 0.847±0.32 1.511±1.24 3.723±1.08
ENSMUSG00000048833 ENSMUST00000085245 17.242±3.70 21.506±5.11 14.076±0.10 8.823±2.74 17.003±5.52 40.010±7.81 7.533±0.51 21.054±2.57 14.000±5.21 23.567±4.40 2.331±0.28 23.334±8.00 8.911±2.22 4.101±1.62
ENSMUSG00000066438 ENSMUST00000140770 0.135±0.12 0.030±0.00 2.656±0.13 1.157±0.47 0.278±0.10 1.590±0.75 0.094±0.01 1.505±0.38 0.415±0.75 9.745±2.32 0.137±0.07 9.477±4.21 7.898±3.86 1.684±0.39
ENSMUST00000142760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.261±0.14 N/A N/A N/A
ENSMUST00000152465 N/A N/A N/A 10.299±0.00 N/A N/A N/A N/A N/A N/A 0.252±0.10 81.573±0.00 60.926±25.61 15.879±0.00
ENSMUST00000153762 0.050±0.00 0.068±0.02 N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.00 N/A N/A N/A

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