C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histone cluster 1, H4j
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000067455 Hist1h4j 10090 + 13:21735064-21735837 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000087714 Hist1h4j-001 21735064-21735837 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000087714
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000087714 1.431±1.09 0.277±0.23 0.752±0.14 8.563±0.28 1.664±0.80 4.699±1.15 0.291±0.14 0.491±0.20 15.546±17.22 1.156±0.17 0.081±0.00 6.481±3.58 1.865±2.70 5.530±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096D CIL_00096D_0002 VISTA 13:21673105-22276611
CIL_0000LH CIL_0000LH_0002 CGP 13:21722098-21735837

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000228 IEA nuclear chromosome
GO:0000786 ISS nucleosome
GO:0003677 ISS DNA binding
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0006334 ISS nucleosome assembly
GO:0006335 IEA DNA replication-dependent nucleosome assembly
GO:0006336 IEA DNA replication-independent nucleosome assembly
GO:0016020 IEA membrane
GO:0043234 IEA protein complex
GO:0044822 IEA poly(A) RNA binding
GO:0045653 IEA negative regulation of megakaryocyte differentiation
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089044 HIST2H4A protein_coding Danio_rerio
ENSDARG00000090941 si:ch73-36p18.4 si:ch73-36p18.4 protein_coding Danio_rerio
ENSG00000277157 HIST1H4D histone cluster 1, H4d protein_coding Homo_sapiens

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