C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: EF hand and coiled-coil domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000068263 Efcc1 10090 + 6:87730869-87755908 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032132 Efcc1-004 87730893-87755908 protein_coding
  ENSMUST00000159570 Efcc1-001 87730869-87755451 protein_coding
  ENSMUST00000159681 Efcc1-003 87753522-87754762 retained_intron
  ENSMUST00000159956 Efcc1-002 87732809-87751896 processed_transcript
  ENSMUST00000160743 Efcc1-005 87730869-87734017 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032132ENSMUST00000159570ENSMUST00000159681ENSMUST00000159956ENSMUST00000160743
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032132 0.795±0.20 0.289±0.08 0.825±0.00 0.739±0.37 0.261±0.00 1.109±0.71 0.118±0.00 0.472±0.00 N/A 1.855±1.04 0.110±0.05 0.954±0.52 N/A 0.123±0.00
ENSMUST00000159570 0.703±0.27 0.342±0.22 1.008±0.00 N/A 0.832±0.16 1.614±0.56 0.295±0.10 0.497±0.10 0.155±0.07 2.602±0.31 0.112±0.00 1.407±0.32 0.428±0.00 N/A
ENSMUST00000159681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.346±0.00 N/A N/A N/A
ENSMUST00000159956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.083±0.01 N/A N/A N/A
ENSMUST00000160743 N/A N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A N/A N/A 0.019±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003B7 CIL_0003B7_0002 CGP 6:87730869-87779762

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079765 AL929022.2 Uncharacterized protein protein_coding Danio_rerio
ENSG00000114654 EFCC1 EF-hand and coiled-coil domain containing 1 protein_coding Homo_sapiens

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