C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003B7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114654-ENSG00000169704 CGP 9606 3:129001629-129062406
GeneTranscriptPositionBiotype
ENSG00000114654 (EFCC1)
EF-hand and coiled-coil domain containing 1
ENST00000436022 (EFCC1-001) 129001629-129040742 protein_coding
ENST00000481536 (EFCC1-002) 129030449-129040740 retained_intron
ENSG00000169704 (GP9)
glycoprotein IX (platelet)
ENST00000307395 (GP9-001) 129060767-129062406 protein_coding
ENSG00000249505 (RP11-434H6.2)
ENST00000510422 (RP11-434H6.2-001) 129045763-129046921 processed_pseudogene
CIL_0003B7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000068263-ENSMUSG00000030054 CGP 10090 6:87730869-87779762
GeneTranscriptPositionBiotype
ENSMUSG00000030054 (Gp9)
glycoprotein 9 (platelet)
ENSMUST00000032133 (Gp9-201) 87778136-87779762 protein_coding
ENSMUSG00000068262 (Gm5879)
predicted gene 5879
ENSMUST00000089501 (Gm5879-201) 87764993-87766204 processed_pseudogene
ENSMUSG00000068263 (Efcc1)
EF hand and coiled-coil domain containing 1
ENSMUST00000032132 (Efcc1-004) 87730893-87755908 protein_coding
ENSMUST00000159570 (Efcc1-001) 87730869-87755451 protein_coding
ENSMUST00000159681 (Efcc1-003) 87753522-87754762 retained_intron
ENSMUST00000159956 (Efcc1-002) 87732809-87751896 processed_transcript
ENSMUST00000160743 (Efcc1-005) 87730869-87734017 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003B7_0001ENSG00000114654ENST00000436022ENST00000481536ENSG00000169704ENST00000307395ENSG00000249505ENST00000510422CIL_0003B7_0002ENSMUSG00000030054ENSMUST00000032133ENSMUSG00000068262ENSMUST00000089501ENSMUSG00000068263ENSMUST00000032132ENSMUST00000159570ENSMUST00000159681ENSMUST00000159956ENSMUST00000160743
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003B7_0001ENSG00000114654ENST00000436022ENST00000481536ENSG00000169704ENST00000307395ENSG00000249505ENST00000510422CIL_0003B7_0002ENSMUSG00000030054ENSMUST00000032133ENSMUSG00000068262ENSMUST00000089501ENSMUSG00000068263ENSMUST00000032132ENSMUST00000159570ENSMUST00000159681ENSMUST00000159956ENSMUST00000160743
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114654 ENST00000436022 1.196±0.00 2.911±0.00 N/A 0.498±0.19 1.510±0.00 0.963±0.46 0.528±0.05 0.921±0.74 0.244±0.00 6.350±4.29 0.598±0.00 3.861±4.92 1.428±0.29 1.239±0.85
ENST00000481536 N/A N/A 0.086±0.00 N/A 0.446±0.00 0.182±0.00 N/A N/A 0.637±0.00 N/A N/A 2.234±0.00 N/A 0.280±0.00
ENSG00000169704 ENST00000307395 0.077±0.00 N/A N/A N/A 0.092±0.00 0.087±0.00 0.243±0.00 0.560±0.00 0.191±0.00 4.672±0.00 N/A 0.121±0.06 0.780±0.20 0.524±0.00
ENSG00000249505 ENST00000510422 N/A 0.045±0.00 N/A N/A 0.055±0.00 0.049±0.00 N/A N/A N/A N/A N/A 0.133±0.00 0.111±0.00 0.045±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030054 ENSMUST00000032133 0.119±0.05 0.433±0.19 0.083±0.00 0.243±0.10 0.244±0.10 0.143±0.05 1.963±1.25 0.339±0.13 17.147±14.91 4.347±0.31 0.112±0.00 0.267±0.15 2.022±1.22 0.054±0.02
ENSMUSG00000068262 ENSMUST00000089501 0.089±0.04 0.129±0.06 0.143±0.01 0.676±0.91 0.076±0.02 0.122±0.05 0.030±0.00 0.100±0.06 0.804±1.93 0.049±0.00 N/A 0.126±0.06 0.112±0.07 0.031±0.00
ENSMUSG00000068263 ENSMUST00000032132 0.795±0.20 0.289±0.08 0.825±0.00 0.739±0.37 0.261±0.00 1.109±0.71 0.118±0.00 0.472±0.00 N/A 1.855±1.04 0.110±0.05 0.954±0.52 N/A 0.123±0.00
ENSMUST00000159570 0.703±0.27 0.342±0.22 1.008±0.00 N/A 0.832±0.16 1.614±0.56 0.295±0.10 0.497±0.10 0.155±0.07 2.602±0.31 0.112±0.00 1.407±0.32 0.428±0.00 N/A
ENSMUST00000159681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.346±0.00 N/A N/A N/A
ENSMUST00000159956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.083±0.01 N/A N/A N/A
ENSMUST00000160743 N/A N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A N/A N/A 0.019±0.00 N/A

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