C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin 3, epithelial
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000069601 Ank3 10090 + 10:69533772-70027438 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047061 Ank3-201 69534222-70015633 protein_coding
  ENSMUST00000054167 Ank3-202 69534222-70015633 protein_coding
  ENSMUST00000092431 Ank3-203 69534222-70015633 protein_coding
  ENSMUST00000092432 Ank3-204 69534222-70015633 protein_coding
  ENSMUST00000092433 Ank3-018 69925532-70024954 protein_coding
  ENSMUST00000092434 Ank3-205 69534222-70015633 protein_coding
  ENSMUST00000181974 Ank3-024 69925954-70024643 protein_coding
  ENSMUST00000182029 Ank3-022 69925805-70015805 protein_coding
  ENSMUST00000182142 Ank3-008 69706296-69710476 retained_intron
  ENSMUST00000182155 Ank3-011 69533843-70024626 protein_coding
  ENSMUST00000182162 Ank3-004 69706478-69822635 retained_intron
  ENSMUST00000182194 Ank3-013 69533772-69872460 retained_intron
  ENSMUST00000182207 Ank3-031 69980323-70024882 protein_coding
  ENSMUST00000182239 Ank3-033 69914865-69953526 retained_intron
  ENSMUST00000182269 Ank3-019 69925773-70024882 protein_coding
  ENSMUST00000182367 Ank3-017 69925495-69926338 retained_intron
  ENSMUST00000182373 Ank3-012 69533815-69850727 retained_intron
  ENSMUST00000182379 Ank3-002 69533772-69720860 processed_transcript
  ENSMUST00000182437 Ank3-026 69926133-70023995 protein_coding
  ENSMUST00000182439 Ank3-027 69534208-70023866 protein_coding
  ENSMUST00000182474 Ank3-003 69706474-69995240 retained_intron
  ENSMUST00000182492 Ank3-007 69785514-69810465 retained_intron
  ENSMUST00000182557 Ank3-010 69534065-69825081 protein_coding
  ENSMUST00000182606 Ank3-037 69982124-69999703 retained_intron
  ENSMUST00000182665 Ank3-029 69989935-70024447 nonsense_mediated_decay
  ENSMUST00000182683 Ank3-034 69899069-69973887 protein_coding
  ENSMUST00000182687 Ank3-023 69925819-69994510 retained_intron
  ENSMUST00000182692 Ank3-030 69925495-70023957 protein_coding
  ENSMUST00000182762 Ank3-028 69973799-69982302 retained_intron
  ENSMUST00000182795 Ank3-025 69926080-70024626 protein_coding
  ENSMUST00000182884 Ank3-001 69533772-70027438 protein_coding
  ENSMUST00000182972 Ank3-016 69898131-70023921 protein_coding
  ENSMUST00000182992 Ank3-005 69706370-70015631 protein_coding
  ENSMUST00000182993 Ank3-009 69785525-69858521 protein_coding
  ENSMUST00000183001 Ank3-036 69994303-70004724 retained_intron
  ENSMUST00000183023 Ank3-006 69987849-70024628 protein_coding
  ENSMUST00000183074 Ank3-021 69925773-70024882 protein_coding
  ENSMUST00000183082 Ank3-035 69979362-69986110 protein_coding
  ENSMUST00000183148 Ank3-015 69533847-70024882 protein_coding
  ENSMUST00000183169 Ank3-014 69533847-70024882 protein_coding
  ENSMUST00000183240 Ank3-032 69787456-69850148 protein_coding
  ENSMUST00000183261 Ank3-020 69925773-70024882 protein_coding
  ENSMUST00000185582 Ank3-039 69992091-69998168 protein_coding
  ENSMUST00000186247 Ank3-038 69978471-69999498 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047061ENSMUST00000054167ENSMUST00000092431ENSMUST00000092432ENSMUST00000092433ENSMUST00000181974ENSMUST00000182029ENSMUST00000182155ENSMUST00000182437ENSMUST00000182683ENSMUST00000182795ENSMUST00000182884ENSMUST00000182972ENSMUST00000183148ENSMUST00000183169ENSMUST00000183261ENSMUST00000186247
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047061 N/A N/A N/A N/A N/A N/A N/A N/A 0.414±0.00 N/A N/A N/A N/A N/A
ENSMUST00000054167 1.189±1.16 0.164±0.00 N/A N/A 0.766±0.32 1.403±0.38 2.099±0.31 3.296±0.77 0.334±0.11 3.155±0.58 N/A 2.159±0.92 N/A 0.379±0.10
ENSMUST00000092431 N/A 0.129±0.00 N/A N/A N/A 1.247±0.22 N/A 3.497±1.23 N/A 2.080±0.00 N/A 1.485±0.00 N/A 0.370±0.00
ENSMUST00000092432 N/A N/A N/A N/A N/A 2.287±0.00 N/A N/A 0.523±0.09 1.948±0.00 N/A 2.149±1.17 0.375±0.00 0.322±0.00
ENSMUST00000092433 N/A N/A N/A N/A N/A N/A N/A N/A 0.500±0.23 N/A N/A N/A 2.478±0.00 0.386±0.00
ENSMUST00000181974 N/A N/A 7.872±1.28 N/A N/A 3.045±0.57 N/A 10.051±1.45 1.004±0.47 N/A N/A N/A 2.981±1.39 0.476±0.00
ENSMUST00000182029 N/A N/A N/A N/A N/A 1.956±0.00 N/A N/A N/A N/A N/A N/A 0.770±0.00 N/A
ENSMUST00000182155 0.514±0.64 0.114±0.00 N/A N/A N/A N/A N/A N/A 0.511±0.00 2.066±0.00 N/A 2.565±0.39 N/A N/A
ENSMUST00000182437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.682±1.25 N/A N/A N/A
ENSMUST00000182683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.327±0.00 32.449±0.00
ENSMUST00000182795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.834±1.33 N/A
ENSMUST00000182884 0.857±0.58 0.260±0.07 4.608±1.08 18.096±5.37 0.375±0.12 1.229±0.22 0.795±0.00 4.611±0.93 0.394±0.17 2.697±0.12 3.302±0.36 1.154±0.55 0.791±0.36 0.211±0.04
ENSMUST00000182972 N/A N/A N/A N/A N/A N/A N/A N/A 0.237±0.00 N/A N/A 11.241±0.00 0.848±0.00 12.461±0.00
ENSMUST00000183148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.332±0.50 N/A N/A N/A
ENSMUST00000183169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.147±0.19 N/A N/A N/A
ENSMUST00000183261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.247±0.71 N/A N/A N/A
ENSMUST00000186247 N/A 0.120±0.04 N/A 22.985±8.97 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.205±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000281 IEA mitotic cytokinesis
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005764 IEA lysosome
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0005923 IEA tight junction
GO:0007009 IEA plasma membrane organization
GO:0007165 IEA signal transduction
GO:0007409 IMP axonogenesis
GO:0007411 IMP axon guidance
GO:0007528 IEA neuromuscular junction development
GO:0009925 IEA basal plasma membrane
GO:0010650 IEA positive regulation of cell communication by electrical coupling
GO:0014704 IDA intercalated disc
GO:0016020 IDA membrane
GO:0016323 IEA basolateral plasma membrane
GO:0016328 IEA lateral plasma membrane
GO:0016529 IEA sarcoplasmic reticulum
GO:0019228 IMP neuronal action potential
GO:0030018 IEA Z disc
GO:0030424 IDA axon
GO:0030425 IEA dendrite
GO:0031594 IEA neuromuscular junction
GO:0033268 IDA node of Ranvier
GO:0033270 IDA paranode region of axon
GO:0034112 IEA positive regulation of homotypic cell-cell adhesion
GO:0042383 IEA sarcolemma
GO:0043001 IEA Golgi to plasma membrane protein transport
GO:0043005 IEA neuron projection
GO:0043194 IDA axon initial segment
GO:0045184 IEA establishment of protein localization
GO:0045202 IDA synapse
GO:0045211 IEA postsynaptic membrane
GO:0045760 TAS positive regulation of action potential
GO:0050808 IMP synapse organization
GO:0071709 IEA membrane assembly
GO:0072659 IDA protein localization to plasma membrane
GO:0072660 IEA maintenance of protein location in plasma membrane
GO:0072661 IMP protein targeting to plasma membrane
GO:0090314 IEA positive regulation of protein targeting to membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061736 ank3a ankyrin 3a protein_coding Danio_rerio
ENSDARG00000077582 ank3b ankyrin 3b protein_coding Danio_rerio
ENSG00000151150 ANK3 ankyrin 3, node of Ranvier (ankyrin G) protein_coding Homo_sapiens

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