C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin 3, epithelial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000054167 Ank3-202 ENSMUSG00000069601 10090 + 10:69534222-70015633 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000054167
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000054167 1.189±1.16 0.164±0.00 0.766±0.32 1.403±0.38 2.099±0.31 3.296±0.77 0.334±0.11 3.155±0.58 2.159±0.92 0.379±0.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005764 IEA lysosome
GO:0005856 IEA cytoskeleton
GO:0007165 IEA signal transduction
GO:0007409 IMP axonogenesis
GO:0007411 IMP axon guidance
GO:0014704 IDA intercalated disc
GO:0016020 IDA membrane
GO:0019228 IMP neuronal action potential
GO:0030424 IDA axon
GO:0033268 IDA node of Ranvier
GO:0033270 IDA paranode region of axon
GO:0043194 IDA axon initial segment
GO:0045202 IDA synapse
GO:0045760 TAS positive regulation of action potential
GO:0050808 IMP synapse organization
GO:0072659 IDA protein localization to plasma membrane
GO:0072661 IMP protein targeting to plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000280772 ANK3-001 protein_coding Homo_sapiens 0 2889
ENST00000355288 ANK3-002 protein_coding Homo_sapiens 0 2736
ENST00000373815 ANK3-008 protein_coding Homo_sapiens 0 750
ENST00000373820 ANK3-009 protein_coding Homo_sapiens 0 889
ENST00000373827 ANK3-004 protein_coding Homo_sapiens 0 2885
ENST00000459732 ANK3-021 protein_coding Homo_sapiens 0 405
ENST00000465749 ANK3-020 retained_intron Homo_sapiens 0 435
ENST00000467420 ANK3-003 protein_coding Homo_sapiens 0 359
ENST00000503366 ANK3-005 protein_coding Homo_sapiens 0 2950
ENST00000503925 ANK3-010 protein_coding Homo_sapiens 0 909
ENST00000506635 ANK3-012 protein_coding Homo_sapiens 0 285
ENST00000508449 ANK3-022 retained_intron Homo_sapiens 0 396
ENST00000511043 ANK3-023 protein_coding Homo_sapiens 0 597
ENST00000513049 ANK3-013 protein_coding Homo_sapiens 0 571
ENST00000514197 ANK3-014 protein_coding Homo_sapiens 0 584
ENST00000610321 ANK3-034 protein_coding Homo_sapiens 0 1580
ENST00000610901 ANK3-029 protein_coding Homo_sapiens 0 514
ENST00000613207 ANK3-030 protein_coding Homo_sapiens 0 573
ENST00000616444 ANK3-033 protein_coding Homo_sapiens 0 2398
ENST00000618080 ANK3-035 protein_coding Homo_sapiens 0 340
ENST00000618374 ANK3-201 protein_coding Homo_sapiens 0 2728
ENST00000621739 ANK3-028 nonsense_mediated_decay Homo_sapiens 0 516
ENST00000622427 ANK3-015 nonsense_mediated_decay Homo_sapiens 0 1650

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