C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene 1673
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000070858 Gm1673 10090 + 5:33983437-33985013 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000094869 Gm1673-001 33983466-33985013 protein_coding
  ENSMUST00000114382 Gm1673-005 33983534-33985009 protein_coding
  ENSMUST00000114383 Gm1673-002 33983470-33985009 protein_coding
  ENSMUST00000114384 Gm1673-003 33983437-33985009 protein_coding
  ENSMUST00000142510 Gm1673-004 33983510-33985010 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000094869ENSMUST00000114382ENSMUST00000114383ENSMUST00000114384ENSMUST00000142510
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000094869 3.620±1.28 40.585±18.76 1.979±0.51 54.860±31.97 2.654±1.07 1.134±0.30 1.560±0.57 0.937±0.52 0.763±0.47 3.835±0.38 0.168±0.05 16.690±5.15 2.410±0.55 27.222±10.48
ENSMUST00000114382 0.780±0.00 N/A N/A N/A 0.985±0.03 N/A 1.448±0.00 1.023±0.00 0.152±0.04 N/A N/A N/A 1.387±0.07 N/A
ENSMUST00000114383 5.215±2.86 20.684±6.42 3.541±0.49 122.020±87.46 3.359±1.22 2.468±1.08 1.500±0.36 0.812±0.32 1.226±1.02 4.168±0.40 N/A 25.740±9.28 3.744±1.53 44.931±21.30
ENSMUST00000114384 0.810±0.30 6.120±1.57 N/A 27.503±9.54 0.833±0.00 0.453±0.06 0.245±0.00 0.216±0.06 0.258±0.00 0.986±0.25 N/A 5.456±1.49 N/A 8.727±0.01
ENSMUST00000142510 N/A N/A N/A N/A N/A N/A N/A 0.533±0.00 0.694±0.00 N/A 0.237±0.16 2.154±0.00 2.715±0.82 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006V6 CIL_0006V6_0002 CGP 5:33896936-33985013
CIL_0006V7 CIL_0006V7_0002 CGP 5:33983437-34005916

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089877 C7H4orf48 chromosome 4 open reading frame 48 protein_coding Danio_rerio
ENSG00000243449 C4orf48 chromosome 4 open reading frame 48 protein_coding Homo_sapiens

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