C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vertebrae development associated
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000071235 Vrtn 10090 + 12:84641019-84651455 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000095551 Vrtn-201 84642896-84651455 protein_coding
  ENSMUST00000166772 Vrtn-202 84641019-84651455 protein_coding
  ENSMUST00000167227 Vrtn-203 84642555-84651455 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryTestisENSMUST00000095551ENSMUST00000167227
Transcript ID Brain Liver Ovary Testis
ENSMUST00000095551 0.009±0.01 0.002±0.00 2.422±1.16 0.121±0.04
ENSMUST00000167227 N/A N/A 0.493±0.18 0.079±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000231 CIL_000231_0002 CGP 12:84602531-84651455
CIL_0004KJ CIL_0004KJ_0003 CGP 12:84641019-84698807

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061963 vrtn vertebrae development homolog (pig) protein_coding Danio_rerio
ENSG00000133980 VRTN vertebrae development associated protein_coding Homo_sapiens

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