C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cDNA sequence BC100530
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000071561 BC100530 10090 - 16:36359382-36367748 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000096089 BC100530-001 36359382-36367748 protein_coding
  ENSMUST00000138796 BC100530-003 36359385-36367548 nonsense_mediated_decay
  ENSMUST00000146691 BC100530-002 36364041-36367551 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverLungPlacentaTestisENSMUST00000096089ENSMUST00000138796ENSMUST00000146691
Transcript ID Bladder Brain Liver Lung Placenta Testis
ENSMUST00000096089 0.016±0.00 0.455±0.15 187.624±150.14 0.106±0.00 0.147±0.03 0.146±0.07
ENSMUST00000138796 N/A N/A N/A N/A 0.597±0.23 N/A
ENSMUST00000146691 0.140±0.00 N/A N/A N/A 0.069±0.04 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QT CIL_0002QT_0007 CGP 16:36321665-36367748
CIL_0002QT CIL_0002QT_0005 CGP 16:36359382-36408363

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004869 IEA cysteine-type endopeptidase inhibitor activity
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0008150 ND biological_process
GO:0010951 IEA negative regulation of endopeptidase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028164 si:ch211-161h7.6 si:ch211-161h7.6 protein_coding Danio_rerio
ENSDARG00000045352 zgc:56530 zgc:56530 protein_coding Danio_rerio
ENSDARG00000045980 zgc:153129 zgc:153129 protein_coding Danio_rerio
ENSG00000121552 CSTA cystatin A (stefin A) protein_coding Homo_sapiens

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