C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002QT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000028164-ENSDARG00000045352 CGP 7955 24:21525203-21530166
GeneTranscriptPositionBiotype
ENSDARG00000028164 (si:ch211-161h7.6)
si:ch211-161h7.6 		ENSDART00000043193 (si:ch211-161h7.6-002) 21525203-21526357 protein_coding
ENSDART00000136663 (si:ch211-161h7.6-001) 21525203-21526864 nonsense_mediated_decay
ENSDARG00000045352 (zgc:56530)
zgc:56530 		ENSDART00000037224 (zgc:56530-001) 21529015-21530166 protein_coding
CIL_0002QT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022902-ENSMUSG00000054905 CGP 10090 16:36403946-36455392
GeneTranscriptPositionBiotype
ENSMUSG00000022902 (Stfa2)
stefin A2 		ENSMUST00000023619 (Stfa2-201) 36403946-36408363 protein_coding
ENSMUSG00000054905 (Stfa3)
stefin A3 		ENSMUST00000068182 (Stfa3-201) 36450537-36455392 protein_coding
CIL_0002QT_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034362-ENSMUSG00000059657 CGP 10090 16:36119946-36161948
GeneTranscriptPositionBiotype
ENSMUSG00000034362 (Csta1)
cystatin A1 		ENSMUST00000096090 (Csta1-001) 36119946-36131241 protein_coding
ENSMUST00000161638 (Csta1-002) 36122169-36131205 protein_coding
ENSMUSG00000059657 (Stfa2l1)
stefin A2 like 1 		ENSMUST00000079184 (Stfa2l1-201) 36156811-36161948 protein_coding
CIL_0002QT_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000059657-ENSMUSG00000079597 CGP 10090 16:36156811-36188111
GeneTranscriptPositionBiotype
ENSMUSG00000059657 (Stfa2l1)
stefin A2 like 1 		ENSMUST00000079184 (Stfa2l1-201) 36156811-36161948 protein_coding
ENSMUSG00000079597 (Gm5483)
predicted gene 5483 		ENSMUST00000114858 (Gm5483-201) 36184212-36188111 protein_coding
CIL_0002QT_0005 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000071561-ENSMUSG00000022902 CGP 10090 16:36359382-36408363
GeneTranscriptPositionBiotype
ENSMUSG00000022902 (Stfa2)
stefin A2 		ENSMUST00000023619 (Stfa2-201) 36403946-36408363 protein_coding
ENSMUSG00000071561 (BC100530)
cDNA sequence BC100530 		ENSMUST00000096089 (BC100530-001) 36359382-36367748 protein_coding
ENSMUST00000138796 (BC100530-003) 36359385-36367548 nonsense_mediated_decay
ENSMUST00000146691 (BC100530-002) 36364041-36367551 retained_intron
ENSMUSG00000087689 (Gm15845)
predicted gene 15845 		ENSMUST00000130244 (Gm15845-001) 36367070-36387406 antisense
CIL_0002QT_0006 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000071562-ENSMUSG00000079595 CGP 10090 16:36277148-36312653
GeneTranscriptPositionBiotype
ENSMUSG00000071562 (Stfa1)
stefin A1 		ENSMUST00000042097 (Stfa1-201) 36277148-36285371 protein_coding
ENSMUSG00000079595 (Gm4758)
predicted gene 4758 		ENSMUST00000114851 (Gm4758-201) 36308045-36312653 protein_coding
ENSMUSG00000096186 (Gm23306)
predicted gene, 23306 		ENSMUST00000179058 (Gm23306-201) 36285433-36285537 snRNA
CIL_0002QT_0007 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000079594-ENSMUSG00000071561 CGP 10090 16:36321665-36367748
GeneTranscriptPositionBiotype
ENSMUSG00000071561 (BC100530)
cDNA sequence BC100530 		ENSMUST00000096089 (BC100530-001) 36359382-36367748 protein_coding
ENSMUST00000138796 (BC100530-003) 36359385-36367548 nonsense_mediated_decay
ENSMUST00000146691 (BC100530-002) 36364041-36367551 retained_intron
ENSMUSG00000079594 (BC117090)
cDNA sequence BC1179090 		ENSMUST00000114850 (BC117090-201) 36321665-36334332 protein_coding
ENSMUSG00000087689 (Gm15845)
predicted gene 15845 		ENSMUST00000130244 (Gm15845-001) 36367070-36387406 antisense
CIL_0002QT_0008 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000079595-ENSMUSG00000079594 CGP 10090 16:36308045-36334332
GeneTranscriptPositionBiotype
ENSMUSG00000079594 (BC117090)
cDNA sequence BC1179090 		ENSMUST00000114850 (BC117090-201) 36321665-36334332 protein_coding
ENSMUSG00000079595 (Gm4758)
predicted gene 4758 		ENSMUST00000114851 (Gm4758-201) 36308045-36312653 protein_coding
CIL_0002QT_0009 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000079597-ENSMUSG00000094733 CGP 10090 16:36184212-36217788
GeneTranscriptPositionBiotype
ENSMUSG00000078097 (Gm10913)
predicted pseudogene 10913 		ENSMUST00000133732 (Gm10913-001) 36209277-36209739 processed_pseudogene
ENSMUSG00000079597 (Gm5483)
predicted gene 5483 		ENSMUST00000114858 (Gm5483-201) 36184212-36188111 protein_coding
ENSMUSG00000094733 (Gm5416)
predicted gene 5416 		ENSMUST00000089628 (Gm5416-001) 36210403-36217788 protein_coding
CIL_0002QT_000A (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000094733-ENSMUSG00000095620 CGP 10090 16:36210403-36257444
GeneTranscriptPositionBiotype
ENSMUSG00000094733 (Gm5416)
predicted gene 5416 		ENSMUST00000089628 (Gm5416-001) 36210403-36217788 protein_coding
ENSMUSG00000095620 (2010005H15Rik)
RIKEN cDNA 2010005H15 gene 		ENSMUST00000063539 (2010005H15Rik-201) 36253046-36257372 protein_coding
ENSMUST00000187183 (2010005H15Rik-001) 36221468-36257444 protein_coding
ENSMUST00000187742 (2010005H15Rik-002) 36221562-36257427 protein_coding
CIL_0002QT_000B (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000095620-ENSMUSG00000071562 CGP 10090 16:36221468-36285371
GeneTranscriptPositionBiotype
ENSMUSG00000071562 (Stfa1)
stefin A1 		ENSMUST00000042097 (Stfa1-201) 36277148-36285371 protein_coding
ENSMUSG00000095620 (2010005H15Rik)
RIKEN cDNA 2010005H15 gene 		ENSMUST00000063539 (2010005H15Rik-201) 36253046-36257372 protein_coding
ENSMUST00000187183 (2010005H15Rik-001) 36221468-36257444 protein_coding
ENSMUST00000187742 (2010005H15Rik-002) 36221562-36257427 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002QT_0001ENSDARG00000028164ENSDART00000043193ENSDART00000136663ENSDARG00000045352ENSDART00000037224CIL_0002QT_0002ENSMUSG00000022902ENSMUST00000023619ENSMUSG00000054905ENSMUST00000068182CIL_0002QT_0003ENSMUSG00000034362ENSMUST00000096090ENSMUST00000161638ENSMUSG00000059657ENSMUST00000079184CIL_0002QT_0004ENSMUSG00000059657ENSMUST00000079184ENSMUSG00000079597ENSMUST00000114858CIL_0002QT_0005ENSMUSG00000022902ENSMUST00000023619ENSMUSG00000071561ENSMUST00000096089ENSMUST00000138796ENSMUST00000146691ENSMUSG00000087689ENSMUST00000130244CIL_0002QT_0006ENSMUSG00000071562ENSMUST00000042097ENSMUSG00000079595ENSMUST00000114851ENSMUSG00000096186ENSMUST00000179058CIL_0002QT_0007ENSMUSG00000071561ENSMUST00000096089ENSMUST00000138796ENSMUST00000146691ENSMUSG00000079594ENSMUST00000114850ENSMUSG00000087689ENSMUST00000130244CIL_0002QT_0008ENSMUSG00000079594ENSMUST00000114850ENSMUSG00000079595ENSMUST00000114851CIL_0002QT_0009ENSMUSG00000078097ENSMUST00000133732ENSMUSG00000079597ENSMUST00000114858ENSMUSG00000094733ENSMUST00000089628CIL_0002QT_000AENSMUSG00000094733ENSMUST00000089628ENSMUSG00000095620ENSMUST00000063539ENSMUST00000187183ENSMUST00000187742CIL_0002QT_000BENSMUSG00000071562ENSMUST00000042097ENSMUSG00000095620ENSMUST00000063539ENSMUST00000187183ENSMUST00000187742
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002QT_0001ENSDARG00000028164ENSDART00000043193ENSDART00000136663ENSDARG00000045352ENSDART00000037224CIL_0002QT_0002ENSMUSG00000022902ENSMUST00000023619ENSMUSG00000054905ENSMUST00000068182CIL_0002QT_0003ENSMUSG00000034362ENSMUST00000096090ENSMUST00000161638ENSMUSG00000059657ENSMUST00000079184CIL_0002QT_0004ENSMUSG00000059657ENSMUST00000079184ENSMUSG00000079597ENSMUST00000114858CIL_0002QT_0005ENSMUSG00000022902ENSMUST00000023619ENSMUSG00000071561ENSMUST00000096089ENSMUST00000138796ENSMUST00000146691ENSMUSG00000087689ENSMUST00000130244CIL_0002QT_0006ENSMUSG00000071562ENSMUST00000042097ENSMUSG00000079595ENSMUST00000114851ENSMUSG00000096186ENSMUST00000179058CIL_0002QT_0007ENSMUSG00000071561ENSMUST00000096089ENSMUST00000138796ENSMUST00000146691ENSMUSG00000079594ENSMUST00000114850ENSMUSG00000087689ENSMUST00000130244CIL_0002QT_0008ENSMUSG00000079594ENSMUST00000114850ENSMUSG00000079595ENSMUST00000114851CIL_0002QT_0009ENSMUSG00000078097ENSMUST00000133732ENSMUSG00000079597ENSMUST00000114858ENSMUSG00000094733ENSMUST00000089628CIL_0002QT_000AENSMUSG00000094733ENSMUST00000089628ENSMUSG00000095620ENSMUST00000063539ENSMUST00000187183ENSMUST00000187742CIL_0002QT_000BENSMUSG00000071562ENSMUST00000042097ENSMUSG00000095620ENSMUST00000063539ENSMUST00000187183ENSMUST00000187742
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000028164 ENSDART00000043193 N/A N/A N/A 2.228±1.01 N/A N/A 2.574±0.95 5.612±0.00 0.192±0.00 N/A 0.366±0.00 N/A N/A N/A
ENSDART00000136663 N/A N/A N/A 2.393±0.53 N/A N/A 0.377±0.10 0.881±0.78 N/A N/A 1.279±0.00 N/A N/A N/A
ENSDARG00000045352 ENSDART00000037224 N/A N/A N/A 17.512±1.94 N/A N/A 20.133±4.86 33.245±4.45 0.707±0.00 N/A 4.861±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022902 ENSMUST00000023619 N/A N/A N/A 0.159±0.09 N/A N/A N/A 0.306±0.12 134.219±163.94 N/A N/A N/A 0.564±0.57 0.102±0.00
ENSMUSG00000054905 ENSMUST00000068182 N/A N/A 0.096±0.03 0.468±0.12 N/A N/A N/A N/A 161.034±165.72 N/A N/A N/A 0.269±0.10 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034362 ENSMUST00000096090 N/A N/A 0.014±0.00 0.015±0.00 0.055±0.02 0.077±0.03 N/A 0.016±0.00 0.005±0.00 0.388±0.26 0.017±0.01 0.010±0.00 0.010±0.00 0.008±0.00
ENSMUST00000161638 N/A N/A 0.078±0.00 0.030±0.00 0.253±0.00 N/A N/A N/A 0.046±0.00 0.639±0.00 0.387±0.00 0.062±0.00 0.088±0.07 N/A
ENSMUSG00000059657 ENSMUST00000079184 N/A N/A N/A 0.396±0.02 N/A N/A N/A N/A 155.790±176.46 0.410±0.00 N/A N/A 0.425±0.44 0.386±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000059657 ENSMUST00000079184 N/A N/A N/A 0.396±0.02 N/A N/A N/A N/A 155.790±176.46 0.410±0.00 N/A N/A 0.425±0.44 0.386±0.09
ENSMUSG00000079597 ENSMUST00000114858 N/A N/A N/A 0.278±0.01 N/A N/A N/A N/A 260.237±263.26 N/A 0.108±0.00 N/A 0.399±0.47 0.109±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022902 ENSMUST00000023619 N/A N/A N/A 0.159±0.09 N/A N/A N/A 0.306±0.12 134.219±163.94 N/A N/A N/A 0.564±0.57 0.102±0.00
ENSMUSG00000071561 ENSMUST00000096089 N/A N/A 0.016±0.00 0.455±0.15 N/A N/A N/A N/A 187.624±150.14 0.106±0.00 N/A N/A 0.147±0.03 0.146±0.07
ENSMUST00000138796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.597±0.23 N/A
ENSMUST00000146691 N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.069±0.04 N/A
ENSMUSG00000087689 ENSMUST00000130244 N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.037±0.00 0.041±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000071562 ENSMUST00000042097 0.150±0.00 N/A 0.031±0.00 0.777±0.14 N/A N/A N/A N/A 469.734±370.53 0.265±0.00 N/A N/A 0.520±0.28 0.368±0.09
ENSMUSG00000079595 ENSMUST00000114851 N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 N/A N/A N/A 0.835±0.76 N/A
ENSMUSG00000096186 ENSMUST00000179058 N/A N/A N/A N/A N/A N/A N/A N/A 42.860±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000071561 ENSMUST00000096089 N/A N/A 0.016±0.00 0.455±0.15 N/A N/A N/A N/A 187.624±150.14 0.106±0.00 N/A N/A 0.147±0.03 0.146±0.07
ENSMUST00000138796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.597±0.23 N/A
ENSMUST00000146691 N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.069±0.04 N/A
ENSMUSG00000079594 ENSMUST00000114850 N/A N/A N/A 0.036±0.00 N/A N/A N/A N/A 0.822±0.59 N/A N/A N/A 0.152±0.08 N/A
ENSMUSG00000087689 ENSMUST00000130244 N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.037±0.00 0.041±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000079594 ENSMUST00000114850 N/A N/A N/A 0.036±0.00 N/A N/A N/A N/A 0.822±0.59 N/A N/A N/A 0.152±0.08 N/A
ENSMUSG00000079595 ENSMUST00000114851 N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 N/A N/A N/A 0.835±0.76 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000078097 ENSMUST00000133732 N/A N/A 0.315±0.24 0.110±0.00 N/A N/A 0.119±0.00 N/A 0.244±0.15 0.127±0.00 0.205±0.08 0.395±0.18 0.441±0.50 0.276±0.14
ENSMUSG00000079597 ENSMUST00000114858 N/A N/A N/A 0.278±0.01 N/A N/A N/A N/A 260.237±263.26 N/A 0.108±0.00 N/A 0.399±0.47 0.109±0.00
ENSMUSG00000094733 ENSMUST00000089628 N/A N/A N/A N/A N/A N/A N/A N/A 6.674±9.31 N/A N/A N/A 0.448±0.38 1.077±0.38
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000094733 ENSMUST00000089628 N/A N/A N/A N/A N/A N/A N/A N/A 6.674±9.31 N/A N/A N/A 0.448±0.38 1.077±0.38
ENSMUSG00000095620 ENSMUST00000063539 N/A N/A N/A N/A N/A N/A N/A N/A 42.497±0.00 N/A N/A 0.190±0.00 0.814±0.93 N/A
ENSMUST00000187183 N/A 0.456±0.00 0.046±0.01 0.054±0.00 N/A 0.292±0.10 N/A 0.200±0.15 2.417±3.73 0.284±0.11 N/A 0.156±0.00 0.366±0.36 N/A
ENSMUST00000187742 N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A 21.407±38.57 0.163±0.00 0.095±0.00 0.132±0.00 0.366±0.01 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000071562 ENSMUST00000042097 0.150±0.00 N/A 0.031±0.00 0.777±0.14 N/A N/A N/A N/A 469.734±370.53 0.265±0.00 N/A N/A 0.520±0.28 0.368±0.09
ENSMUSG00000095620 ENSMUST00000063539 N/A N/A N/A N/A N/A N/A N/A N/A 42.497±0.00 N/A N/A 0.190±0.00 0.814±0.93 N/A
ENSMUST00000187183 N/A 0.456±0.00 0.046±0.01 0.054±0.00 N/A 0.292±0.10 N/A 0.200±0.15 2.417±3.73 0.284±0.11 N/A 0.156±0.00 0.366±0.36 N/A
ENSMUST00000187742 N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A 21.407±38.57 0.163±0.00 0.095±0.00 0.132±0.00 0.366±0.01 N/A

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