C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: terminal uridylyl transferase 1, U6 snRNA-specific
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000071645 Tut1 10090 + 19:8953850-8966207 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000096239 Tut1-201 8953850-8966207 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000096239
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000096239 8.309±3.07 13.410±1.28 8.409±1.56 7.600±1.82 9.055±2.67 8.893±0.79 2.916±0.28 6.160±0.57 6.868±1.90 8.864±0.42 3.314±0.20 11.905±2.61 8.635±3.22 17.281±3.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0002 VISTA 19:8644197-9245760

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 ISS RNA binding
GO:0003730 ISS mRNA 3'-UTR binding
GO:0004652 ISS polynucleotide adenylyltransferase activity
GO:0005524 IEA ATP binding
GO:0005730 ISS nucleolus
GO:0005847 ISS mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 ISS mRNA polyadenylation
GO:0006379 ISS mRNA cleavage
GO:0016180 ISS snRNA processing
GO:0016607 ISS nuclear speck
GO:0046872 IEA metal ion binding
GO:0050265 ISS RNA uridylyltransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057321 tut1 terminal uridylyl transferase 1, U6 snRNA-specific protein_coding Danio_rerio
ENSG00000149016 TUT1 terminal uridylyl transferase 1, U6 snRNA-specific protein_coding Homo_sapiens
ENSG00000255508 MIR3654 microRNA 3654 protein_coding Homo_sapiens

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