C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat and FYVE domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000073643 Wdfy1 10090 - 1:79702262-79776143 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048820 Wdfy1-002 79726403-79761769 protein_coding
  ENSMUST00000113510 Wdfy1-011 79718974-79761769 protein_coding
  ENSMUST00000113511 Wdfy1-012 79718974-79761769 protein_coding
  ENSMUST00000113512 Wdfy1-001 79702262-79761769 protein_coding
  ENSMUST00000113513 Wdfy1-003 79702262-79761769 protein_coding
  ENSMUST00000113514 Wdfy1-009 79702262-79761769 protein_coding
  ENSMUST00000113515 Wdfy1-008 79702262-79761769 protein_coding
  ENSMUST00000125641 Wdfy1-004 79733853-79762047 protein_coding
  ENSMUST00000127771 Wdfy1-007 79719163-79722656 processed_transcript
  ENSMUST00000130714 Wdfy1-010 79719163-79730098 processed_transcript
  ENSMUST00000138319 Wdfy1-006 79726605-79730098 processed_transcript
  ENSMUST00000143368 Wdfy1-005 79724697-79776143 protein_coding
  ENSMUST00000186464 Wdfy1-014 79733620-79761721 retained_intron
  ENSMUST00000187005 Wdfy1-013 79705357-79761738 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000113512ENSMUST00000113513ENSMUST00000113514ENSMUST00000113515ENSMUST00000186464ENSMUST00000187005
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000113512 1.518±0.68 N/A 3.656±0.20 4.682±2.52 1.517±0.25 2.164±0.00 0.975±0.03 2.051±0.25 1.026±0.46 1.789±0.00 1.572±0.22 2.183±0.23 N/A
ENSMUST00000113513 2.299±1.23 N/A 1.800±0.41 2.606±1.23 1.840±0.53 2.285±0.43 0.975±0.03 2.521±0.71 0.838±0.16 3.426±1.02 1.697±0.39 2.183±0.23 N/A
ENSMUST00000113514 1.518±0.68 N/A 2.283±0.50 3.477±1.65 1.517±0.25 2.164±0.00 0.975±0.03 2.051±0.25 0.911±0.23 1.789±0.00 1.572±0.22 2.183±0.23 N/A
ENSMUST00000113515 2.299±1.23 N/A 1.448±0.05 2.397±0.93 1.840±0.53 2.285±0.43 0.975±0.03 2.521±0.71 0.838±0.16 3.426±1.02 1.697±0.39 2.183±0.23 N/A
ENSMUST00000186464 11.842±2.75 29.179±5.38 N/A N/A 19.869±8.41 41.116±9.80 N/A 15.646±1.31 6.376±0.87 18.834±3.99 27.211±6.33 N/A N/A
ENSMUST00000187005 2.337±0.00 N/A N/A 8.610±0.00 3.073±0.00 6.717±3.08 N/A 4.514±0.00 N/A 3.819±0.00 4.246±1.49 7.891±2.51 69.144±18.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XJ CIL_0006XJ_0002 CGP 1:79606876-79776143
CIL_0006XI CIL_0006XI_0002 CGP 1:79702262-79781445

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005545 IEA 1-phosphatidylinositol binding
GO:0005634 IEA nucleus
GO:0005769 IEA early endosome
GO:0005829 IEA cytosol
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005425 wdfy1 WD repeat and FYVE domain containing 1 protein_coding Danio_rerio
ENSG00000085449 WDFY1 WD repeat and FYVE domain containing 1 protein_coding Homo_sapiens

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