C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006XJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000152056-ENSG00000085449 CGP 9606 2:223751686-223945387
GeneTranscriptPositionBiotype
ENSG00000085449 (WDFY1)
WD repeat and FYVE domain containing 1 		ENST00000233055 (WDFY1-001) 223875347-223945387 protein_coding
ENST00000429915 (WDFY1-005) 223894290-223945357 protein_coding
ENST00000462702 (WDFY1-006) 223855716-223878688 processed_transcript
ENST00000483061 (WDFY1-002) 223900855-223945335 retained_intron
ENST00000491453 (WDFY1-003) 223884669-223894460 retained_intron
ENST00000493001 (WDFY1-004) 223894235-223899276 retained_intron
ENSG00000152056 (AP1S3)
adaptor-related protein complex 1, sigma 3 subunit 		ENST00000334271 (AP1S3-003) 223756990-223837570 nonsense_mediated_decay
ENST00000396653 (AP1S3-005) 223765078-223837582 protein_coding
ENST00000396654 (AP1S3-007) 223758482-223837582 protein_coding
ENST00000409375 (AP1S3-006) 223765310-223837541 protein_coding
ENST00000415298 (AP1S3-002) 223756989-223837735 nonsense_mediated_decay
ENST00000443700 (AP1S3-001) 223751686-223837602 protein_coding
ENST00000444408 (AP1S3-004) 223765268-223838027 protein_coding
ENST00000446015 (AP1S3-008) 223765177-223837484 protein_coding
CIL_0006XJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000054702-ENSMUSG00000073643 CGP 10090 1:79606876-79776143
GeneTranscriptPositionBiotype
ENSMUSG00000026248 (Mrpl44)
mitochondrial ribosomal protein L44 		ENSMUST00000027464 (Mrpl44-001) 79776018-79781445 protein_coding
ENSMUST00000189176 (Mrpl44-002) 79776116-79778546 retained_intron
ENSMUSG00000054702 (Ap1s3)
adaptor-related protein complex AP-1, sigma 3 		ENSMUST00000159312 (Ap1s3-002) 79608845-79671965 nonsense_mediated_decay
ENSMUST00000160706 (Ap1s3-003) 79609186-79671968 nonsense_mediated_decay
ENSMUST00000162342 (Ap1s3-001) 79606876-79671972 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006XJ_0001ENSG00000085449ENST00000233055ENST00000429915ENST00000462702ENST00000483061ENST00000491453ENST00000493001ENSG00000152056ENST00000334271ENST00000396653ENST00000396654ENST00000409375ENST00000415298ENST00000443700ENST00000444408ENST00000446015CIL_0006XJ_0002ENSMUSG00000026248ENSMUST00000027464ENSMUST00000189176ENSMUSG00000054702ENSMUST00000159312ENSMUST00000160706ENSMUST00000162342
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006XJ_0001ENSG00000085449ENST00000233055ENSG00000152056ENST00000334271ENST00000396653ENST00000396654ENST00000409375ENST00000415298ENST00000443700ENST00000446015CIL_0006XJ_0002ENSMUSG00000026248ENSMUST00000027464ENSMUST00000189176ENSMUSG00000054702ENSMUST00000159312ENSMUST00000160706ENSMUST00000162342
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000085449 ENST00000233055 13.552±0.00 7.090±0.00 3.904±0.00 6.353±1.96 6.203±1.08 7.139±0.08 2.595±0.41 4.881±3.20 3.536±0.42 8.231±2.84 2.409±1.31 9.327±2.67 5.613±2.11 7.610±3.44
ENST00000429915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000152056 ENST00000334271 0.159±0.00 N/A N/A 0.134±0.12 0.349±0.00 0.068±0.00 0.074±0.00 N/A 0.284±0.00 0.553±0.00 0.076±0.00 0.335±0.00 N/A N/A
ENST00000396653 N/A N/A N/A N/A N/A 1.917±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000396654 N/A N/A N/A N/A N/A N/A N/A N/A 0.764±0.00 0.654±0.00 N/A 1.635±1.15 3.831±0.00 N/A
ENST00000409375 N/A N/A N/A 0.358±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415298 N/A N/A N/A N/A N/A 0.251±0.00 N/A N/A N/A 0.306±0.00 N/A N/A N/A N/A
ENST00000443700 N/A 0.427±0.00 N/A 0.033±0.00 0.119±0.01 0.015±0.00 N/A 1.158±0.00 0.107±0.07 0.311±0.08 N/A 0.156±0.10 0.187±0.00 0.446±0.37
ENST00000444408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446015 N/A N/A 2.553±0.00 N/A 1.111±0.00 N/A 0.223±0.00 0.869±0.00 N/A N/A N/A 5.642±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026248 ENSMUST00000027464 6.454±1.11 8.441±0.93 16.393±2.51 12.428±2.06 6.622±2.39 9.218±4.55 14.145±1.24 10.953±1.58 7.980±3.82 5.197±1.18 20.537±2.52 10.736±9.93 19.159±8.00 N/A
ENSMUST00000189176 N/A 17.135±2.18 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000054702 ENSMUST00000159312 N/A N/A N/A N/A 3.154±0.82 6.063±1.46 N/A N/A N/A N/A N/A 4.159±0.00 N/A N/A
ENSMUST00000160706 27.131±1.66 1.008±0.40 N/A N/A 12.426±4.64 32.528±5.77 0.745±0.12 13.322±2.61 1.012±0.00 12.875±2.77 N/A 6.723±2.06 N/A N/A
ENSMUST00000162342 5.113±0.46 0.710±0.06 5.828±0.93 N/A 1.628±0.84 4.061±0.85 0.344±0.09 3.033±0.77 1.447±0.37 3.295±1.33 1.018±0.00 2.347±1.31 6.174±3.68 1.072±0.00

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