C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA binding motif protein 15B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000074102 Rbm15b 10090 - 9:106880918-106887428 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000055843 Rbm15b-001 106880918-106887428 protein_coding
  ENSMUST00000098424 Rbm15b-201 106880929-106882289 protein_coding
  ENSMUST00000185707 Rbm15b-002 106884751-106885619 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000055843ENSMUST00000185707
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000055843 7.488±3.87 6.676±0.71 6.061±0.19 13.740±5.73 6.277±1.49 9.694±2.13 2.417±0.10 4.001±0.40 4.060±2.00 7.821±0.28 1.245±0.11 16.920±3.48 5.451±0.54
ENSMUST00000185707 N/A N/A N/A 65.079±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MV CIL_0005MV_0003 CGP 9:106838312-106891979

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000381 ISS regulation of alternative mRNA splicing, via spliceosome
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005654 IEA nucleoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078966 rbm15b RNA binding motif protein 15B protein_coding Danio_rerio
ENSG00000259956 RBM15B RNA binding motif protein 15B protein_coding Homo_sapiens

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