C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: eukaryotic translation initiation factor 2, subunit 2 (beta)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000074656 Eif2s2 10090 - 2:154871410-154892935 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000099173 Eif2s2-001 154871410-154892935 protein_coding
  ENSMUST00000135524 Eif2s2-003 154884378-154892808 retained_intron
  ENSMUST00000147136 Eif2s2-002 154884343-154892831 retained_intron
  ENSMUST00000161172 Eif2s2-005 154884375-154892795 protein_coding
  ENSMUST00000166171 Eif2s2-201 154871418-154892782 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099173ENSMUST00000161172ENSMUST00000166171
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099173 10.345±1.85 5.213±0.50 18.854±5.21 14.712±8.82 4.269±1.04 12.384±1.52 8.139±0.47 9.276±1.69 19.206±14.67 7.596±1.34 51.702±3.46 4.905±3.42 20.529±14.79 14.404±4.21
ENSMUST00000161172 N/A N/A N/A 45.256±0.00 N/A N/A N/A N/A N/A N/A N/A 50.984±50.27 334.066±117.86 126.763±0.00
ENSMUST00000166171 N/A N/A N/A 8.307±0.00 5.248±3.68 7.212±2.23 N/A 2.594±0.00 4.386±1.95 1.300±0.00 9.806±0.00 7.652±7.61 38.356±10.08 11.979±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098F CIL_00098F_0002 VISTA 2:154750090-155352094
CIL_000766 CIL_000766_0002 CGP 2:154791402-155051012

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0002176 IMP male germ cell proliferation
GO:0003743 ISS translation initiation factor activity
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0006413 IEA translational initiation
GO:0008584 IMP male gonad development
GO:0044822 IEA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053047 eif2s2 eukaryotic translation initiation factor 2, subunit 2 beta protein_coding Danio_rerio
ENSG00000125977 EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa protein_coding Homo_sapiens

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