C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 2, subunit 2 (beta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166171 Eif2s2-201 ENSMUSG00000074656 10090 - 2:154871418-154892782 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000166171
Transcript ID Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000166171 8.307±0.00 5.248±3.68 7.212±2.23 2.594±0.00 4.386±1.95 1.300±0.00 9.806±0.00 7.652±7.61 38.356±10.08 11.979±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098F CIL_00098F_0002 VISTA 2:154750090-155352094
CIL_000766 CIL_000766_0002 CGP 2:154791402-155051012

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0002176 IMP male germ cell proliferation
GO:0003743 ISS translation initiation factor activity
GO:0005575 ND cellular_component
GO:0006413 IEA translational initiation
GO:0008584 IMP male gonad development
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374980 EIF2S2-001 protein_coding Homo_sapiens 0 1816
ENST00000428356 EIF2S2P3-001 processed_pseudogene Homo_sapiens 0 1238
ENST00000447161 EIF2S2P2-001 processed_pseudogene Homo_sapiens 0 1140
ENST00000457635 EIF2S2P5-001 processed_pseudogene Homo_sapiens 0 865
ENST00000461070 EIF2S2P4-001 processed_pseudogene Homo_sapiens 0 1308
ENST00000527936 RP11-718B12.5-001 processed_pseudogene Homo_sapiens 0 492
ENST00000557650 RP11-804M7.1-001 processed_pseudogene Homo_sapiens 0 616
ENST00000604970 RP11-443I9.1-001 processed_pseudogene Homo_sapiens 0 730

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