C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synapse differentiation inducing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000074736 Syndig1 10090 + 2:149829211-150004392 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000109934 Syndig1-003 149830843-150004392 protein_coding
  ENSMUST00000109935 Syndig1-001 149830788-150004392 protein_coding
  ENSMUST00000137280 Syndig1-004 149830901-149899751 protein_coding
  ENSMUST00000140870 Syndig1-006 149830869-149899755 protein_coding
  ENSMUST00000144179 Syndig1-002 149829211-149899714 protein_coding
  ENSMUST00000149705 Syndig1-005 149830922-149899881 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000109934ENSMUST00000109935ENSMUST00000140870ENSMUST00000144179ENSMUST00000149705
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000109934 N/A 0.132±0.00 N/A N/A 0.089±0.00 N/A N/A N/A N/A 0.041±0.00 N/A N/A N/A
ENSMUST00000109935 3.312±2.56 0.408±0.20 13.919±1.01 2.692±0.26 0.083±0.01 1.869±0.82 0.063±0.02 0.073±0.03 0.113±0.05 0.038±0.00 5.352±2.25 0.340±0.59 0.162±0.15
ENSMUST00000140870 N/A N/A N/A N/A N/A N/A 0.235±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000144179 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.142±0.00 N/A N/A N/A
ENSMUST00000149705 3.594±2.97 0.652±0.07 N/A N/A 0.249±0.12 1.785±0.57 0.034±0.00 0.108±0.02 0.106±0.00 0.081±0.03 6.066±1.51 N/A 0.051±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005887 IDA integral component of plasma membrane
GO:0006886 IDA intracellular protein transport
GO:0009607 IEA response to biotic stimulus
GO:0014069 IDA postsynaptic density
GO:0030054 IEA cell junction
GO:0031901 IDA early endosome membrane
GO:0035254 IPI glutamate receptor binding
GO:0042803 IDA protein homodimerization activity
GO:0043197 ISS dendritic spine
GO:0043198 ISS dendritic shaft
GO:0044297 ISS cell body
GO:0045211 IEA postsynaptic membrane
GO:0051965 IDA positive regulation of synapse assembly
GO:0060076 ISS excitatory synapse
GO:0097091 ISS synaptic vesicle clustering

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075204 SYNDIG1 synapse differentiation inducing 1 protein_coding Danio_rerio
ENSG00000101463 SYNDIG1 synapse differentiation inducing 1 protein_coding Homo_sapiens

Loading