C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interferon-induced protein with tetratricopeptide repeats 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000074896 Ifit3 10090 + 19:34583531-34588731 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102825 Ifit3-001 34583531-34588731 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102825
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102825 3.957±1.01 1.121±0.46 14.314±3.32 0.531±0.57 4.356±2.00 0.497±0.23 1.672±0.19 7.269±0.90 3.818±3.94 7.116±1.46 1.050±0.15 1.974±1.71 1.951±1.48 0.164±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BE CIL_0007BE_0009 CGP 19:34550694-34588731
CIL_0007BE CIL_0007BE_000C CGP 19:34583531-34601968

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 ISS cytoplasm
GO:0005739 ISS mitochondrion
GO:0008285 ISS negative regulation of cell proliferation
GO:0009615 ISS response to virus
GO:0035457 IEA cellular response to interferon-alpha
GO:0035458 IDA cellular response to interferon-beta
GO:0035634 IEP response to stilbenoid
GO:0043066 ISS negative regulation of apoptotic process
GO:0045087 IEA innate immune response
GO:0051607 IEA defense response to virus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007467 si:dkey-26g8.11 si:dkey-26g8.11 protein_coding Danio_rerio
ENSDARG00000043584 ifit2 interferon-induced protein with tetratricopeptide repeats 2 protein_coding Danio_rerio
ENSDARG00000056976 si:ch211-240h7.2 si:ch211-240h7.2 protein_coding Danio_rerio
ENSDARG00000057173 zgc:123282 zgc:123282 protein_coding Danio_rerio
ENSDARG00000071012 si:dkey-116m16.3 si:dkey-116m16.3 protein_coding Danio_rerio
ENSDARG00000088069 CR759879.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090537 si:dkey-26g8.10 si:dkey-26g8.10 protein_coding Danio_rerio
ENSDARG00000090977 ifit5 interferon-induced protein with tetratricopeptide repeats 5 protein_coding Danio_rerio
ENSG00000119917 IFIT3 interferon-induced protein with tetratricopeptide repeats 3 protein_coding Homo_sapiens

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