C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spectrin beta, non-erythrocytic 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000074899 Sptbn5 10090 - 2:120046157-120085772 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000110756 Sptbn5-002 120061586-120072523 protein_coding
  ENSMUST00000125737 Sptbn5-004 120059068-120061436 protein_coding
  ENSMUST00000134935 Sptbn5-003 120076214-120085772 protein_coding
  ENSMUST00000156159 Sptbn5-001 120046157-120057497 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110756ENSMUST00000125737ENSMUST00000134935ENSMUST00000156159
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110756 0.092±0.03 0.105±0.03 0.131±0.01 0.041±0.01 0.158±0.08 0.133±0.05 0.069±0.03 0.165±0.04 0.017±0.01 0.180±0.00 0.193±0.03 0.323±0.18 0.094±0.05 0.810±0.77
ENSMUST00000125737 0.130±0.05 0.105±0.04 0.255±0.04 0.221±0.21 0.285±0.09 0.141±0.12 0.108±0.03 0.107±0.02 0.037±0.02 N/A 0.188±0.07 0.406±0.31 0.136±0.07 0.899±0.53
ENSMUST00000134935 0.047±0.03 0.048±0.02 0.018±0.00 0.013±0.01 0.186±0.11 0.054±0.02 0.042±0.02 0.132±0.06 0.015±0.01 0.166±0.03 0.138±0.05 0.072±0.04 0.036±0.01 0.315±0.23
ENSMUST00000156159 0.122±0.07 0.063±0.03 0.410±0.01 0.764±0.00 0.255±0.18 0.268±0.06 0.175±0.09 0.335±0.11 0.031±0.03 0.202±0.00 0.184±0.12 0.559±0.21 0.196±0.06 0.539±0.36

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002046 IDA opsin binding
GO:0005515 IPI protein binding
GO:0005737 ISO cytoplasm
GO:0005875 IDA microtubule associated complex
GO:0005930 ISO axoneme
GO:0007030 ISO Golgi organization
GO:0007041 ISO lysosomal transport
GO:0008022 IPI protein C-terminus binding
GO:0019894 ISO kinesin binding
GO:0030507 IPI spectrin binding
GO:0030863 IDA cortical cytoskeleton
GO:0032029 ISO myosin tail binding
GO:0032391 ISO photoreceptor connecting cilium
GO:0034452 ISO dynactin binding
GO:0043234 ISO protein complex
GO:0043621 ISO protein self-association
GO:0045179 IDA apical cortex
GO:0045505 ISO dynein intermediate chain binding
GO:0046982 IDA protein heterodimerization activity
GO:0051015 IDA actin filament binding
GO:0051260 ISO protein homooligomerization
GO:0097381 ISO photoreceptor disc membrane

Homologs

No Homologs available.

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