C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spectrin beta, non-erythrocytic 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110756 Sptbn5-002 ENSMUSG00000074899 10090 - 2:120061586-120072523 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110756
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110756 0.092±0.03 0.105±0.03 0.131±0.01 0.041±0.01 0.158±0.08 0.133±0.05 0.069±0.03 0.165±0.04 0.017±0.01 0.180±0.00 0.193±0.03 0.323±0.18 0.094±0.05 0.810±0.77

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002046 IDA opsin binding
GO:0005515 IPI protein binding
GO:0005737 ISO cytoplasm
GO:0005875 IDA microtubule associated complex
GO:0005930 ISO axoneme
GO:0007030 ISO Golgi organization
GO:0007041 ISO lysosomal transport
GO:0008022 IPI protein C-terminus binding
GO:0019894 ISO kinesin binding
GO:0030507 IPI spectrin binding
GO:0030863 IDA cortical cytoskeleton
GO:0032029 ISO myosin tail binding
GO:0032391 ISO photoreceptor connecting cilium
GO:0034452 ISO dynactin binding
GO:0043234 ISO protein complex
GO:0043621 ISO protein self-association
GO:0045179 IDA apical cortex
GO:0045505 ISO dynein intermediate chain binding
GO:0046982 IDA protein heterodimerization activity
GO:0051015 IDA actin filament binding
GO:0051260 ISO protein homooligomerization
GO:0097381 ISO photoreceptor disc membrane

Homologs

No Homologs available.

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