C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1700001L05 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000075511 1700001L05Rik 10090 - 15:83357526-83367282 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000100370 1700001L05Rik-003 83357560-83367277 lincRNA
  ENSMUST00000177890 1700001L05Rik-004 83358618-83365142 lincRNA
  ENSMUST00000178628 1700001L05Rik-001 83357526-83367282 lincRNA
  ENSMUST00000179705 1700001L05Rik-002 83357534-83367011 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100370ENSMUST00000177890ENSMUST00000178628ENSMUST00000179705
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100370 1.157±0.19 0.186±0.03 3.051±0.00 0.057±0.03 0.552±0.16 0.698±0.20 0.195±0.03 0.420±0.12 0.883±0.42 0.324±0.07 0.045±0.02 0.398±0.00 0.686±0.41 82.871±38.63
ENSMUST00000177890 N/A N/A N/A 0.583±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.379±0.61 37.188±0.00
ENSMUST00000178628 1.345±0.00 0.168±0.06 1.705±0.00 N/A 0.649±0.32 0.864±0.12 N/A 0.373±0.14 0.779±0.05 N/A 0.066±0.01 2.353±1.15 0.592±0.33 47.952±22.93
ENSMUST00000179705 N/A 0.125±0.00 N/A N/A 0.799±0.00 N/A N/A N/A N/A N/A N/A 2.056±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LG CIL_0008LG_0002 VISTA 15:83223007-83824071
CIL_0004U5 CIL_0004U5_0002 CGP 15:83299740-83464606
CIL_0008W4 CIL_0008W4_0002 VISTA 15:83338828-83940718

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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