C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: forkhead box D1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000078302 Foxd1 10090 + 13:98354242-98356703 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000105098 Foxd1-001 98354242-98356703 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000105098
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000105098 0.019±0.01 0.937±0.29 0.007±0.00 1.805±0.99 0.103±0.02 0.027±0.01 0.084±0.02 1.137±0.10 0.011±0.00 0.119±0.02 0.042±0.02 0.028±0.01 0.110±0.09 0.023±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001658 IDA branching involved in ureteric bud morphogenesis
GO:0001822 IMP kidney development
GO:0003677 IDA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007411 IMP axon guidance
GO:0008301 ISO DNA binding, bending
GO:0010628 IMP positive regulation of gene expression
GO:0030513 IMP positive regulation of BMP signaling pathway
GO:0043565 IDA sequence-specific DNA binding
GO:0045892 IMP negative regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0060678 IMP dichotomous subdivision of terminal units involved in ureteric bud branching
GO:0072076 IMP nephrogenic mesenchyme development
GO:0072210 IMP metanephric nephron development
GO:0072213 IMP metanephric capsule development
GO:0072267 IMP metanephric capsule specification
GO:0072268 IMP pattern specification involved in metanephros development
GO:0090184 IMP positive regulation of kidney development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079699 forkhead box D2 protein_coding Danio_rerio
ENSG00000251493 FOXD1 forkhead box D1 protein_coding Homo_sapiens

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