C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cDNA sequence BC024978
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000078786 BC024978 10090 + 7:27195781-27205386 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000108379 BC024978-001 27195781-27205386 protein_coding
  ENSMUST00000123108 BC024978-003 27202632-27204320 protein_coding
  ENSMUST00000155931 BC024978-002 27197123-27204161 protein_coding
  ENSMUST00000179391 BC024978-201 27195781-27204320 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleOvaryPlacentaTestisENSMUST00000108379ENSMUST00000179391
Transcript ID Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000108379 0.630±0.00 N/A 1.863±0.00 3.490±0.56 2.165±0.00 N/A
ENSMUST00000179391 N/A 4.183±0.45 N/A N/A N/A 9.853±4.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZN CIL_0002ZN_0002 CGP 7:27187005-27205386
CIL_0006UT CIL_0006UT_0002 CGP 7:27195781-27228628

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039513 C18H19orf54 chromosome 19 open reading frame 54 protein_coding Danio_rerio
ENSG00000188493 C19orf54 chromosome 19 open reading frame 54 protein_coding Homo_sapiens

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