C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002ZN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000018890-ENSDARG00000039513 CGP 7955 18:33747015-33757920
GeneTranscriptPositionBiotype
ENSDARG00000018890 (snrpa)
small nuclear ribonucleoprotein polypeptide A 		ENSDART00000012018 (snrpa-201) 33747015-33752007 protein_coding
ENSDART00000137663 (snrpa-002) 33749402-33751842 protein_coding
ENSDART00000141703 (snrpa-001) 33749402-33752102 protein_coding
ENSDARG00000039513 (C18H19orf54)
chromosome 19 open reading frame 54 		ENSDART00000057733 (C18H19orf54-001) 33752233-33757920 protein_coding
CIL_0002ZN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000061479-ENSMUSG00000078786 CGP 10090 7:27187005-27205386
GeneTranscriptPositionBiotype
ENSMUSG00000061479 (Snrpa)
small nuclear ribonucleoprotein polypeptide A 		ENSMUST00000080356 (Snrpa-001) 27187007-27196271 protein_coding
ENSMUST00000122202 (Snrpa-002) 27187007-27196245 protein_coding
ENSMUST00000126211 (Snrpa-003) 27187327-27195760 protein_coding
ENSMUST00000141378 (Snrpa-004) 27191714-27196024 nonsense_mediated_decay
ENSMUST00000148491 (Snrpa-005) 27187005-27189014 retained_intron
ENSMUST00000163311 (Snrpa-201) 27187007-27195760 protein_coding
ENSMUSG00000078786 (BC024978)
cDNA sequence BC024978 		ENSMUST00000108379 (BC024978-001) 27195781-27205386 protein_coding
ENSMUST00000123108 (BC024978-003) 27202632-27204320 protein_coding
ENSMUST00000155931 (BC024978-002) 27197123-27204161 protein_coding
ENSMUST00000179391 (BC024978-201) 27195781-27204320 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002ZN_0001ENSDARG00000018890ENSDART00000012018ENSDART00000137663ENSDART00000141703ENSDARG00000039513ENSDART00000057733CIL_0002ZN_0002ENSMUSG00000061479ENSMUST00000080356ENSMUST00000122202ENSMUST00000126211ENSMUST00000141378ENSMUST00000148491ENSMUST00000163311ENSMUSG00000078786ENSMUST00000108379ENSMUST00000123108ENSMUST00000155931ENSMUST00000179391
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002ZN_0001ENSDARG00000018890ENSDART00000012018ENSDART00000141703ENSDARG00000039513ENSDART00000057733CIL_0002ZN_0002ENSMUSG00000061479ENSMUST00000080356ENSMUST00000122202ENSMUST00000126211ENSMUST00000148491ENSMUST00000163311ENSMUSG00000078786ENSMUST00000108379ENSMUST00000179391
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000018890 ENSDART00000012018 N/A N/A N/A 14.270±4.96 N/A N/A 7.448±2.03 23.622±7.54 3.011±0.00 N/A 7.101±0.00 N/A N/A N/A
ENSDART00000137663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141703 N/A N/A N/A 20.048±9.23 N/A N/A 5.013±0.00 19.269±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000039513 ENSDART00000057733 N/A N/A N/A 0.909±0.83 N/A N/A 1.132±1.00 1.706±0.28 0.036±0.00 N/A 0.208±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000061479 ENSMUST00000080356 34.994±7.17 57.297±9.38 31.821±2.50 35.636±23.48 44.035±7.17 42.639±6.81 19.531±3.57 33.919±3.91 26.780±9.42 35.900±2.85 7.430±1.04 63.395±26.30 28.022±14.66 27.639±7.72
ENSMUST00000122202 21.769±1.42 38.791±4.71 20.621±0.17 28.631±14.61 24.314±3.36 25.714±4.19 10.641±3.28 18.117±1.36 16.543±8.03 20.446±1.14 4.788±0.97 35.226±12.75 17.471±6.56 19.687±9.86
ENSMUST00000126211 16.565±0.62 N/A 18.492±0.00 36.273±31.35 12.929±1.32 17.981±0.00 N/A N/A 22.035±14.48 N/A 4.581±0.00 70.462±46.44 13.043±4.06 N/A
ENSMUST00000141378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148491 N/A N/A N/A N/A 19.222±0.00 N/A N/A N/A N/A N/A N/A N/A 9.927±0.00 N/A
ENSMUST00000163311 N/A 17.248±0.00 N/A 38.361±19.96 N/A N/A N/A N/A 17.643±6.80 N/A 4.161±0.93 16.492±1.06 8.265±0.00 N/A
ENSMUSG00000078786 ENSMUST00000108379 N/A N/A N/A 0.630±0.00 N/A N/A N/A N/A N/A N/A 1.863±0.00 3.490±0.56 2.165±0.00 N/A
ENSMUST00000123108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179391 N/A N/A N/A N/A N/A N/A N/A N/A 4.183±0.45 N/A N/A N/A N/A 9.853±4.32

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