C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcium channel, voltage-dependent, gamma subunit 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000078815 Cacng6 10090 + 7:3424195-3435667 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000108647 Cacng6-002 3424662-3435163 protein_coding
  ENSMUST00000183200 Cacng6-001 3424195-3435667 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108647ENSMUST00000183200
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108647 N/A 0.134±0.06 0.012±0.00 0.025±0.01 0.087±0.00 0.092±0.01 0.242±0.15 0.183±0.03 N/A 0.223±0.09 N/A 0.261±0.15 0.076±0.03 0.078±0.00
ENSMUST00000183200 0.017±0.00 N/A 0.004±0.00 0.375±0.48 7.866±3.78 0.031±0.00 0.280±0.02 0.464±0.14 0.039±0.04 0.416±0.01 57.408±16.18 0.142±0.05 0.056±0.03 0.023±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VE CIL_0001VE_0002 CGP 7:3390683-3435667

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005244 IEA voltage-gated ion channel activity
GO:0005262 IEA calcium channel activity
GO:0016021 IEA integral component of membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036457 cacng6a calcium channel, voltage-dependent, gamma subunit 6a protein_coding Danio_rerio
ENSDARG00000046079 cacng6b calcium channel, voltage-dependent, gamma subunit 6b protein_coding Danio_rerio
ENSG00000130433 CACNG6 calcium channel, voltage-dependent, gamma subunit 6 protein_coding Homo_sapiens

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