C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interferon gamma induced GTPase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000078853 Igtp 10090 + 11:58199556-58207591 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035266 Igtp-001 58199556-58207591 protein_coding
  ENSMUST00000094169 Igtp-003 58199586-58207565 protein_coding
  ENSMUST00000168280 Igtp-002 58199588-58207575 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035266ENSMUST00000094169ENSMUST00000168280
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035266 9.683±2.93 3.785±0.54 16.291±5.64 0.289±0.07 12.040±3.01 3.532±0.73 4.695±0.83 4.771±1.34 15.152±8.72 5.989±1.85 3.860±0.38 5.440±1.51 2.374±0.41 0.302±0.15
ENSMUST00000094169 5.318±0.00 6.001±1.52 N/A N/A 13.769±0.00 4.036±0.00 2.284±0.00 4.229±0.74 13.782±2.10 3.563±0.40 N/A 3.419±0.00 1.019±0.00 N/A
ENSMUST00000168280 N/A N/A N/A 0.144±0.00 6.712±0.00 2.149±0.00 N/A 3.641±0.42 N/A N/A N/A 4.793±0.08 N/A 0.101±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088D CIL_00088D_0002 VISTA 11:57627590-58231336

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IDA GTPase activity
GO:0005525 IEA GTP binding
GO:0005829 IDA cytosol
GO:0006184 IDA GTP catabolic process
GO:0016020 IEA membrane
GO:0035458 IDA cellular response to interferon-beta

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000237693 IRGM immunity-related GTPase family, M protein_coding Homo_sapiens

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