C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA A130010J15 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000079144 A130010J15Rik 10090 + 1:193168049-193177832 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000110831 A130010J15Rik-001 193173571-193176303 protein_coding
  ENSMUST00000160077 A130010J15Rik-004 193173492-193174831 processed_transcript
  ENSMUST00000160822 A130010J15Rik-003 193168049-193175180 protein_coding
  ENSMUST00000161235 A130010J15Rik-002 193173469-193176298 protein_coding
  ENSMUST00000178744 A130010J15Rik-201 193173577-193177832 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000110831ENSMUST00000160822ENSMUST00000161235ENSMUST00000178744
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000110831 0.464±0.05 0.766±0.34 3.902±0.00 0.781±0.17 N/A 0.603±0.08 1.529±0.29 0.907±0.26 N/A 1.641±0.01 N/A
ENSMUST00000160822 0.936±0.09 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.147±2.26
ENSMUST00000161235 N/A N/A N/A 0.764±0.00 N/A N/A N/A N/A 1.510±0.00 1.343±0.16 0.637±0.00
ENSMUST00000178744 N/A 0.563±0.00 2.391±0.25 0.328±0.00 1.922±0.00 N/A 1.338±0.24 0.631±0.22 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZL CIL_0007ZL_0002 VISTA 1:192841048-193441723
CIL_00089N CIL_00089N_0002 VISTA 1:193149329-193750185

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017657 C6H1orf74 chromosome 1 open reading frame 74 protein_coding Danio_rerio
ENSG00000162757 C1orf74 chromosome 1 open reading frame 74 protein_coding Homo_sapiens

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