C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA A130010J15 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178744 A130010J15Rik-201 ENSMUSG00000079144 10090 + 1:193173577-193177832 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastLiverMuscleENSMUST00000178744
Transcript ID Adrenal Bladder Brain Breast Liver Muscle
ENSMUST00000178744 0.563±0.00 2.391±0.25 0.328±0.00 1.922±0.00 1.338±0.24 0.631±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZL CIL_0007ZL_0002 VISTA 1:192841048-193441723
CIL_00089N CIL_00089N_0002 VISTA 1:193149329-193750185

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294811 C1orf74-001 protein_coding Homo_sapiens 0 734
ENST00000367024 TRAF3IP3-002 protein_coding Homo_sapiens 5e-29 134
ENST00000367025 TRAF3IP3-001 protein_coding Homo_sapiens 5e-29 134
ENST00000367026 TRAF3IP3-012 protein_coding Homo_sapiens 5e-29 134
ENST00000460314 TRAF3IP3-004 retained_intron Homo_sapiens 6e-29 134
ENST00000467830 TRAF3IP3-005 processed_transcript Homo_sapiens 1e-25 121
ENST00000471368 TRAF3IP3-008 nonsense_mediated_decay Homo_sapiens 1e-29 134
ENST00000477431 TRAF3IP3-017 protein_coding Homo_sapiens 2e-29 134

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