C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000079235 Ccdc13 10090 - 9:121797627-121839461 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000126851 Ccdc13-004 121798168-121810310 retained_intron
  ENSMUST00000135986 Ccdc13-001 121797627-121839461 protein_coding
  ENSMUST00000140929 Ccdc13-005 121799092-121810249 retained_intron
  ENSMUST00000142783 Ccdc13-007 121798581-121810146 protein_coding
  ENSMUST00000146716 Ccdc13-002 121817362-121831079 retained_intron
  ENSMUST00000155511 Ccdc13-006 121797633-121810164 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000126851ENSMUST00000135986ENSMUST00000140929ENSMUST00000142783ENSMUST00000146716ENSMUST00000155511
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000126851 N/A 0.145±0.09 2.969±0.00 0.083±0.02 0.137±0.00 N/A 0.050±0.00 N/A N/A 0.146±0.00 N/A N/A N/A
ENSMUST00000135986 0.030±0.01 0.104±0.06 0.810±0.69 N/A 0.035±0.01 0.040±0.01 0.059±0.03 0.012±0.00 0.574±0.35 0.025±0.00 0.930±0.39 0.323±0.08 33.524±2.18
ENSMUST00000140929 N/A N/A N/A N/A N/A 0.065±0.00 0.103±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000142783 0.042±0.01 0.056±0.00 N/A 0.100±0.00 N/A N/A N/A N/A 0.504±0.00 0.083±0.00 0.634±0.06 N/A N/A
ENSMUST00000146716 N/A N/A N/A N/A 0.155±0.01 N/A N/A 0.009±0.00 N/A 0.072±0.00 N/A 0.505±0.00 N/A
ENSMUST00000155511 0.101±0.04 0.395±0.25 N/A 0.193±0.16 0.094±0.03 0.071±0.03 0.130±0.05 0.008±0.00 0.822±0.30 0.091±0.05 0.618±0.13 1.417±0.38 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063451 CCDC13 coiled-coil domain containing 13 protein_coding Danio_rerio
ENSG00000244607 CCDC13 coiled-coil domain containing 13 protein_coding Homo_sapiens

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