C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135986 Ccdc13-001 ENSMUSG00000079235 10090 - 9:121797627-121839461 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000135986
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000135986 0.030±0.01 0.104±0.06 0.810±0.69 0.035±0.01 0.040±0.01 0.059±0.03 0.012±0.00 0.574±0.35 0.025±0.00 0.930±0.39 0.323±0.08 33.524±2.18

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310232 CCDC13-001 protein_coding Homo_sapiens 0 1650
ENST00000431549 HIGD1A-007 nonsense_mediated_decay Homo_sapiens 1.4013e-45 187
ENST00000435327 CCDC13-003 processed_transcript Homo_sapiens 0 470
ENST00000472921 CCDC13-005 processed_transcript Homo_sapiens 0 189
ENST00000479576 CCDC13-007 retained_intron Homo_sapiens 0 448
ENST00000492806 CCDC13-002 retained_intron Homo_sapiens 0 617

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