C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier organic anion transporter family, member 1a6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000079262 Slco1a6 10090 - 6:142085761-142208521 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000111827 Slco1a6-001 142085761-142186153 protein_coding
  ENSMUST00000172984 Slco1a6-002 142109207-142186149 retained_intron
  ENSMUST00000173877 Slco1a6-004 142149026-142157298 processed_transcript
  ENSMUST00000174455 Slco1a6-003 142161048-142208521 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111827ENSMUST00000172984ENSMUST00000173877
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111827 N/A N/A N/A 0.013±0.00 0.032±0.01 N/A N/A 27.312±4.77 0.005±0.00 N/A N/A 0.106±0.00 0.131±0.03 0.109±0.03
ENSMUST00000172984 N/A N/A N/A N/A 0.138±0.09 N/A 0.034±0.00 N/A N/A N/A N/A 0.353±0.00 N/A N/A
ENSMUST00000173877 0.258±0.13 0.524±0.26 0.489±0.12 0.929±0.62 0.447±0.24 0.557±0.48 0.608±0.33 N/A 0.484±0.23 0.447±0.26 0.679±0.33 2.415±2.59 3.545±3.06 1.017±0.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005215 IEA transporter activity
GO:0005886 IEA plasma membrane
GO:0006805 IMP xenobiotic metabolic process
GO:0006811 IEA ion transport
GO:0008206 IMP bile acid metabolic process
GO:0016021 IEA integral component of membrane
GO:0031100 IEA organ regeneration
GO:0035264 IMP multicellular organism growth
GO:0042168 IMP heme metabolic process
GO:0042493 IMP response to drug
GO:0042632 IMP cholesterol homeostasis
GO:0070328 IMP triglyceride homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000084453 SLCO1A2 solute carrier organic anion transporter family, member 1A2 protein_coding Homo_sapiens

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