C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000079442 St6galnac4 10090 + 2:32587095-32599698 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102818 St6galnac4-001 32587095-32599698 protein_coding
  ENSMUST00000123080 St6galnac4-002 32587139-32594275 processed_transcript
  ENSMUST00000146557 St6galnac4-003 32594276-32597189 processed_transcript
  ENSMUST00000179989 St6galnac4-201 32587625-32599075 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102818ENSMUST00000123080ENSMUST00000179989
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102818 3.229±0.61 3.022±0.55 1.883±0.13 2.344±1.03 3.993±1.84 11.468±0.69 1.963±0.25 0.818±0.16 1.069±0.98 6.658±1.29 1.348±0.63 4.420±2.19 1.047±0.56 0.150±0.06
ENSMUST00000123080 5.257±1.86 6.161±0.60 2.558±0.07 2.867±0.30 7.065±3.41 14.833±4.15 3.675±0.45 1.039±0.20 0.473±0.06 7.889±1.20 2.043±0.23 7.184±2.56 1.009±0.00 0.331±0.04
ENSMUST00000179989 4.999±1.77 2.453±0.81 2.437±0.05 4.174±1.53 4.419±1.05 8.505±2.20 3.747±0.46 1.158±0.20 1.545±1.40 6.856±1.80 1.712±0.27 4.112±1.97 1.940±1.01 0.345±0.14

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0008373 IEA sialyltransferase activity
GO:0016021 IEA integral component of membrane
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043897 st6galnac4 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 protein_coding Danio_rerio
ENSG00000136840 ST6GALNAC4 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 protein_coding Homo_sapiens

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