C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 142
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000079511 Ccdc142 10090 + 6:83101617-83109939 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000101253 Ccdc142-001 83101617-83109939 nonsense_mediated_decay
  ENSMUST00000101254 Ccdc142-003 83101617-83108377 protein_coding
  ENSMUST00000134891 Ccdc142-002 83107101-83107834 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000101253ENSMUST00000101254
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000101253 2.183±0.48 2.280±0.25 3.476±0.57 4.489±0.76 2.469±0.27 1.512±0.13 2.269±0.34 2.095±0.78 1.981±0.29 3.031±1.19 1.163±0.22 2.334±1.77
ENSMUST00000101254 2.218±0.16 12.281±2.45 N/A N/A 3.183±1.11 3.002±0.45 N/A 1.356±0.22 2.636±0.51 7.282±1.69 N/A 2.563±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004780 CCDC142 coiled-coil domain containing 142 protein_coding Danio_rerio
ENSG00000135637 CCDC142 coiled-coil domain containing 142 protein_coding Homo_sapiens

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