C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 142
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101254 Ccdc142-003 ENSMUSG00000079511 10090 + 6:83101617-83108377 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLiverLungOvaryTestisENSMUST00000101254
Transcript ID Adipose Adrenal Breast Colon Liver Lung Ovary Testis
ENSMUST00000101254 2.218±0.16 12.281±2.45 3.183±1.11 3.002±0.45 1.356±0.22 2.636±0.51 7.282±1.69 2.563±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290418 CCDC142-001 protein_coding Homo_sapiens 0 1116
ENST00000393965 CCDC142-003 protein_coding Homo_sapiens 0 1203
ENST00000454193 CCDC142-002 nonsense_mediated_decay Homo_sapiens 0 1118
ENST00000471713 CCDC142-009 processed_transcript Homo_sapiens 0 562
ENST00000472962 CCDC142-004 retained_intron Homo_sapiens 5e-39 165

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