C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 6430710C18 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000085427 6430710C18Rik 10090 - 2:72745846-72813717 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000125382 6430710C18Rik-004 72746505-72750853 lincRNA
  ENSMUST00000125746 6430710C18Rik-003 72784991-72800154 lincRNA
  ENSMUST00000136807 6430710C18Rik-001 72745846-72813672 lincRNA
  ENSMUST00000148327 6430710C18Rik-002 72784674-72813717 lincRNA

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000125382ENSMUST00000125746ENSMUST00000136807ENSMUST00000148327
Transcript ID Bladder Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000125382 N/A N/A 0.355±0.18 0.121±0.00 N/A 0.098±0.04 0.114±0.00 N/A 0.565±0.25 N/A
ENSMUST00000125746 0.042±0.00 N/A N/A N/A N/A 0.015±0.00 N/A N/A N/A N/A
ENSMUST00000136807 0.011±0.00 0.010±0.00 0.075±0.01 0.124±0.05 0.027±0.00 N/A 0.015±0.00 0.057±0.02 0.112±0.08 N/A
ENSMUST00000148327 N/A 0.066±0.00 N/A 0.072±0.03 0.041±0.00 0.026±0.00 N/A 0.291±0.13 N/A 0.427±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OE CIL_0007OE_0002 UCNEbase 2:72378722-73287933
CIL_0004JD CIL_0004JD_0002 CGP 2:72476159-72980446

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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