C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 3110099E03 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000085582 3110099E03Rik 10090 - 2:115493513-115527744 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000125147 3110099E03Rik-003 115495731-115512207 lincRNA
  ENSMUST00000134580 3110099E03Rik-001 115493513-115512201 lincRNA
  ENSMUST00000143695 3110099E03Rik-002 115495026-115527744 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyLiverOvaryPlacentaTestisENSMUST00000125147ENSMUST00000134580ENSMUST00000143695
Transcript ID Adipose Adrenal Brain Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000125147 0.132±0.00 0.256±0.02 0.215±0.05 0.418±0.00 N/A 0.025±0.01 0.101±0.00 N/A 0.282±0.03
ENSMUST00000134580 0.053±0.05 0.148±0.00 0.027±0.02 0.056±0.00 0.456±0.17 0.009±0.00 0.104±0.07 0.016±0.01 N/A
ENSMUST00000143695 0.030±0.00 0.151±0.05 0.024±0.00 N/A N/A 0.007±0.00 N/A 0.026±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MM CIL_0007MM_0002 UCNEbase 2:114412124-116821493
CIL_0006HI CIL_0006HI_0002 CGP 2:114516416-115778768
CIL_0008V8 CIL_0008V8_0002 VISTA 2:115237684-115839308
CIL_00088L CIL_00088L_0002 VISTA 2:115356958-115958248
CIL_0008GX CIL_0008GX_0002 VISTA 2:115358281-115959712
CIL_00084J CIL_00084J_0002 VISTA 2:115369514-115969885

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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