C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008V8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs355 VISTA 9606 15:36226820-36828494
GeneTranscriptPositionBiotype
ENSG00000186073 (C15orf41)
chromosome 15 open reading frame 41 		ENST00000338183 (C15orf41-201) 36640605-36810231 protein_coding
ENST00000437989 (C15orf41-002) 36579844-36810244 protein_coding
ENST00000562489 (C15orf41-014) 36702009-36808781 protein_coding
ENST00000562877 (C15orf41-004) 36594900-36808453 protein_coding
ENST00000563167 (C15orf41-013) 36755945-36809347 protein_coding
ENST00000564586 (C15orf41-011) 36579642-36691754 protein_coding
ENST00000565792 (C15orf41-005) 36696407-36810248 processed_transcript
ENST00000566621 (C15orf41-001) 36579611-36810223 protein_coding
ENST00000566677 (C15orf41-006) 36704313-36809498 retained_intron
ENST00000566807 (C15orf41-010) 36594869-36709906 protein_coding
ENST00000566932 (C15orf41-012) 36702050-36808457 processed_transcript
ENST00000567389 (C15orf41-003) 36594894-36810246 protein_coding
ENST00000567573 (C15orf41-009) 36579638-36648757 processed_transcript
ENST00000569302 (C15orf41-008) 36579848-36808901 protein_coding
ENST00000570265 (C15orf41-007) 36579634-36747256 processed_transcript
ENSG00000223518 (CSNK1A1P1)
casein kinase 1, alpha 1 pseudogene 1 		ENST00000430593 (CSNK1A1P1-002) 36798596-36818459 processed_transcript
ENST00000563423 (CSNK1A1P1-001) 36817133-36818113 transcribed_processed_pseudogene
ENST00000569828 (CSNK1A1P1-003) 36817176-36818113 processed_transcript
ENSG00000259395 (RP11-475A13.2)
 ENST00000561236 (RP11-475A13.2-001) 36341739-36344166 lincRNA
ENSG00000259639 (RP11-184D12.1)
 ENST00000560886 (RP11-184D12.1-001) 35939167-35974769 lincRNA
ENST00000561394 (RP11-184D12.1-002) 35970358-36252257 lincRNA
ENSG00000260582 (TPST2P1)
tyrosylprotein sulfotransferase 2 pseudogene 1 		ENST00000564073 (TPST2P1-001) 36626674-36627775 processed_pseudogene
ENSG00000261191 (RP11-16L14.2)
 ENST00000565366 (RP11-16L14.2-001) 36641186-36669097 antisense
ENSG00000261315 (LARP4P)
La ribonucleoprotein domain family, member 4 pseudogene 		ENST00000566382 (LARP4P-001) 36617089-36619265 transcribed_processed_pseudogene
ENSG00000261635 (RP11-618N24.1)
 ENST00000561804 (RP11-618N24.1-001) 36613474-36614198 processed_pseudogene
ENSG00000270500 (COX6CP4)
cytochrome c oxidase subunit VIc pseudogene 4 		ENST00000605798 (COX6CP4-001) 36571985-36572212 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0008V8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs355 VISTA 10090 2:115237684-115839308
GeneTranscriptPositionBiotype
ENSMUSG00000040282 (BC052040)
cDNA sequence BC052040 		ENSMUST00000110918 (BC052040-001) 115581733-115778768 protein_coding
ENSMUST00000147968 (BC052040-002) 115581801-115640643 processed_transcript
ENSMUST00000166472 (BC052040-201) 115581716-115778768 protein_coding
ENSMUSG00000085582 (3110099E03Rik)
RIKEN cDNA 3110099E03 gene 		ENSMUST00000125147 (3110099E03Rik-003) 115495731-115512207 lincRNA
ENSMUST00000134580 (3110099E03Rik-001) 115493513-115512201 lincRNA
ENSMUST00000143695 (3110099E03Rik-002) 115495026-115527744 lincRNA
ENSMUSG00000086197 (Gm13976)
predicted gene 13976 		ENSMUST00000154367 (Gm13976-001) 115344385-115346968 lincRNA
ENSMUSG00000086735 (Gm13977)
predicted gene 13977 		ENSMUST00000133648 (Gm13977-001) 115556786-115581555 antisense
ENSMUSG00000087309 (4930528P14Rik)
RIKEN cDNA 4930528P14 gene 		ENSMUST00000152815 (4930528P14Rik-001) 115329264-115344280 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008V8_0001ENSG00000186073ENST00000338183ENST00000437989ENST00000562489ENST00000562877ENST00000563167ENST00000564586ENST00000565792ENST00000566621ENST00000566677ENST00000566807ENST00000566932ENST00000567389ENST00000567573ENST00000569302ENST00000570265ENSG00000223518ENST00000430593ENST00000563423ENST00000569828ENSG00000259395ENST00000561236ENSG00000259639ENST00000560886ENST00000561394ENSG00000260582ENST00000564073ENSG00000261191ENST00000565366ENSG00000261315ENST00000566382ENSG00000261635ENST00000561804ENSG00000270500ENST00000605798CIL_0008V8_0002ENSMUSG00000040282ENSMUST00000110918ENSMUST00000147968ENSMUST00000166472ENSMUSG00000085582ENSMUST00000125147ENSMUST00000134580ENSMUST00000143695ENSMUSG00000086197ENSMUST00000154367ENSMUSG00000086735ENSMUST00000133648ENSMUSG00000087309ENSMUST00000152815
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008V8_0001ENSG00000186073ENST00000338183ENST00000437989ENST00000562489ENST00000562877ENST00000563167ENST00000564586ENST00000566621ENST00000566677ENST00000566932ENST00000567389ENST00000567573ENST00000569302ENSG00000223518ENST00000430593ENST00000569828ENSG00000259395ENST00000561236ENSG00000259639ENST00000560886ENST00000561394ENSG00000260582ENST00000564073ENSG00000261191ENST00000565366ENSG00000261315ENST00000566382ENSG00000261635ENST00000561804ENSG00000270500ENST00000605798CIL_0008V8_0002ENSMUSG00000040282ENSMUST00000110918ENSMUST00000166472ENSMUSG00000085582ENSMUST00000125147ENSMUST00000134580ENSMUST00000143695ENSMUSG00000086197ENSMUST00000154367ENSMUSG00000086735ENSMUST00000133648ENSMUSG00000087309ENSMUST00000152815
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000186073 ENST00000338183 N/A N/A N/A N/A N/A N/A N/A 0.571±0.00 0.250±0.00 N/A 0.251±0.00 N/A N/A N/A
ENST00000437989 N/A N/A N/A 0.319±0.00 N/A N/A N/A N/A 0.483±0.00 N/A 1.072±0.00 N/A N/A N/A
ENST00000562489 N/A N/A N/A 0.939±0.00 1.375±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 4.845±0.00
ENST00000562877 N/A N/A N/A N/A N/A N/A N/A N/A 3.546±0.00 N/A N/A N/A N/A N/A
ENST00000563167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.272±0.00
ENST00000564586 N/A N/A N/A N/A N/A N/A N/A 0.569±0.00 N/A N/A N/A N/A N/A N/A
ENST00000565792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566621 0.299±0.00 1.846±0.00 N/A 0.661±0.00 N/A 1.353±0.00 12.493±0.00 0.368±0.00 0.139±0.00 0.330±0.00 3.593±0.00 1.060±0.58 0.730±0.19 N/A
ENST00000566677 N/A N/A 0.230±0.00 0.072±0.00 0.111±0.00 0.161±0.00 1.238±0.00 N/A N/A 0.292±0.00 0.135±0.00 0.079±0.00 N/A 0.125±0.00
ENST00000566807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.927±0.00 N/A N/A 1.147±0.00
ENST00000567389 N/A N/A N/A N/A N/A N/A 5.684±0.13 N/A N/A N/A N/A 1.600±0.00 N/A N/A
ENST00000567573 N/A N/A N/A 1.013±0.00 N/A 0.829±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569302 N/A N/A N/A N/A N/A 0.486±0.00 N/A 0.728±0.00 1.972±0.00 0.508±0.00 1.587±0.00 N/A 0.197±0.00 1.467±0.69
ENST00000570265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223518 ENST00000430593 0.006±0.00 0.017±0.00 N/A 0.045±0.03 0.028±0.00 0.047±0.00 0.123±0.00 0.102±0.03 0.005±0.00 0.059±0.02 N/A 0.033±0.03 0.636±0.06 2.734±1.00
ENST00000563423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569828 N/A N/A N/A N/A N/A 0.055±0.00 N/A N/A 0.096±0.00 N/A 0.050±0.00 N/A 2.390±0.00 5.110±0.27
ENSG00000259395 ENST00000561236 0.025±0.00 0.042±0.00 0.065±0.00 0.024±0.00 0.004±0.00 N/A 0.027±0.01 0.179±0.00 0.018±0.00 0.004±0.00 N/A 0.007±0.00 N/A 0.028±0.00
ENSG00000259639 ENST00000560886 0.104±0.00 0.533±0.00 0.142±0.00 0.311±0.00 0.172±0.05 0.526±0.46 0.162±0.05 0.365±0.00 0.067±0.00 0.222±0.00 0.018±0.00 0.133±0.08 N/A 0.204±0.04
ENST00000561394 N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.028±0.00
ENSG00000260582 ENST00000564073 N/A 0.034±0.00 N/A 0.038±0.00 N/A 0.184±0.00 0.105±0.00 0.035±0.00 N/A N/A 0.320±0.00 0.511±0.00 N/A N/A
ENSG00000261191 ENST00000565366 N/A N/A 0.191±0.00 N/A N/A N/A 0.084±0.00 N/A N/A N/A 0.262±0.00 N/A 0.220±0.09 N/A
ENSG00000261315 ENST00000566382 N/A 0.005±0.00 N/A 0.065±0.00 0.106±0.10 0.085±0.00 0.766±0.58 N/A 0.237±0.00 0.084±0.00 0.237±0.23 0.073±0.03 0.010±0.00 0.031±0.00
ENSG00000261635 ENST00000561804 0.097±0.00 0.173±0.00 0.126±0.00 0.132±0.00 0.216±0.13 0.249±0.19 1.625±1.41 0.087±0.00 1.100±0.00 0.340±0.00 0.095±0.00 0.142±0.03 0.045±0.00 0.033±0.00
ENSG00000270500 ENST00000605798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.355±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040282 ENSMUST00000110918 1.149±0.68 0.230±0.04 2.136±0.13 3.240±1.87 1.108±0.33 0.815±0.31 0.920±0.22 1.172±0.38 2.960±1.60 1.021±0.33 0.907±0.23 1.951±0.83 4.328±2.16 1.010±0.51
ENSMUST00000147968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166472 0.705±0.34 1.009±0.38 N/A 0.773±0.00 0.459±0.14 1.272±0.27 0.354±0.07 0.527±0.18 1.446±0.37 0.746±0.05 0.124±0.01 1.806±0.85 1.221±0.00 1.027±0.54
ENSMUSG00000085582 ENSMUST00000125147 0.132±0.00 0.256±0.02 N/A 0.215±0.05 N/A 0.418±0.00 N/A N/A 0.025±0.01 N/A N/A 0.101±0.00 N/A 0.282±0.03
ENSMUST00000134580 0.053±0.05 0.148±0.00 N/A 0.027±0.02 N/A 0.056±0.00 N/A 0.456±0.17 0.009±0.00 N/A N/A 0.104±0.07 0.016±0.01 N/A
ENSMUST00000143695 0.030±0.00 0.151±0.05 N/A 0.024±0.00 N/A N/A N/A N/A 0.007±0.00 N/A N/A N/A 0.026±0.00 N/A
ENSMUSG00000086197 ENSMUST00000154367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.304±1.23
ENSMUSG00000086735 ENSMUST00000133648 0.029±0.01 0.034±0.00 0.016±0.00 0.049±0.03 0.022±0.02 0.032±0.00 0.027±0.01 0.018±0.01 0.021±0.01 0.046±0.02 N/A 0.035±0.02 0.010±0.01 0.057±0.04
ENSMUSG00000087309 ENSMUST00000152815 0.132±0.01 N/A N/A 0.058±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.513±2.84

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