C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 5430405H02 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000085741 5430405H02Rik 10090 - 2:156844351-156862963 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000153616 5430405H02Rik-001 156852430-156862894 antisense
  ENSMUST00000176134 5430405H02Rik-002 156852430-156862945 antisense
  ENSMUST00000185402 5430405H02Rik-004 156844351-156862963 antisense
  ENSMUST00000187327 5430405H02Rik-003 156854116-156856116 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000153616ENSMUST00000176134ENSMUST00000185402ENSMUST00000187327
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000153616 6.212±0.00 N/A 2.536±0.20 10.991±0.13 2.562±0.00 N/A 0.572±0.00 N/A 3.570±0.61 N/A 0.321±0.00 4.923±1.05 6.648±2.45 1.972±0.54
ENSMUST00000176134 2.281±0.13 4.082±0.49 2.937±0.72 N/A 2.950±0.58 2.147±0.30 0.728±0.00 2.120±0.13 1.106±0.64 2.885±0.28 0.463±0.12 7.048±1.48 N/A 2.624±0.18
ENSMUST00000185402 N/A N/A N/A N/A N/A 2.990±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187327 9.596±1.58 N/A 3.749±0.08 12.404±0.75 3.187±1.49 1.445±0.16 0.504±0.02 1.595±0.12 2.806±2.05 2.251±0.32 0.218±0.11 7.069±2.27 8.782±5.01 3.552±1.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006RT CIL_0006RT_0003 CGP 2:156775420-156855570

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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