C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 2700033N17 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000086328 2700033N17Rik 10090 - 2:116066218-116067444 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000140185 2700033N17Rik-001 116066218-116067444 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000140185
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000140185 3.325±2.15 13.760±5.10 3.307±0.13 4.937±0.00 0.569±0.20 1.123±0.32 0.719±0.29 1.683±0.42 0.422±0.27 0.940±0.34 0.082±0.03 2.592±1.05 1.351±0.65 0.095±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MM CIL_0007MM_0002 UCNEbase 2:114412124-116821493
CIL_00087U CIL_00087U_0002 VISTA 2:115567988-116170503
CIL_0008KD CIL_0008KD_0002 VISTA 2:115571243-116172482
CIL_0008O9 CIL_0008O9_0002 VISTA 2:115596429-116199400
CIL_0008M1 CIL_0008M1_0002 VISTA 2:115619997-116221651
CIL_00096Q CIL_00096Q_0002 VISTA 2:115662485-116263540
CIL_0009D1 CIL_0009D1_0002 VISTA 2:115718048-116320475
CIL_00086F CIL_00086F_0002 VISTA 2:115744886-116346285
CIL_0006QR CIL_0006QR_0002 CGP 2:115863064-116892494
CIL_0008SD CIL_0008SD_0002 VISTA 2:115900855-116502747
CIL_0008V9 CIL_0008V9_0002 VISTA 2:115912625-116513751
CIL_00092N CIL_00092N_0002 VISTA 2:116023402-116625066

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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