C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006QR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134138-ENSG00000166069 CGP 9606 15:36889204-37967724
GeneTranscriptPositionBiotype
ENSG00000134138 (MEIS2)
Meis homeobox 2 		ENST00000314177 (MEIS2-012) 36891085-37099721 nonsense_mediated_decay
ENST00000338564 (MEIS2-002) 36889204-37101205 protein_coding
ENST00000340545 (MEIS2-201) 36891022-37101299 protein_coding
ENST00000397620 (MEIS2-005) 36891848-37099396 protein_coding
ENST00000397624 (MEIS2-007) 36891021-37098321 protein_coding
ENST00000424352 (MEIS2-003) 36891850-37100530 protein_coding
ENST00000557796 (MEIS2-017) 36891410-37099306 protein_coding
ENST00000557992 (MEIS2-026) 36894418-36895302 retained_intron
ENST00000558313 (MEIS2-018) 37083790-37101279 protein_coding
ENST00000558643 (MEIS2-022) 36894707-36897150 retained_intron
ENST00000559085 (MEIS2-008) 36891256-37098302 protein_coding
ENST00000559129 (MEIS2-014) 37094516-37096191 retained_intron
ENST00000559371 (MEIS2-027) 36892436-36897076 retained_intron
ENST00000559408 (MEIS2-023) 36894784-36904067 processed_transcript
ENST00000559561 (MEIS2-028) 36894752-37099721 protein_coding
ENST00000559972 (MEIS2-020) 36892056-36895287 retained_intron
ENST00000560570 (MEIS2-009) 36891256-37099482 nonsense_mediated_decay
ENST00000560617 (MEIS2-015) 37083772-37097367 protein_coding
ENST00000560697 (MEIS2-021) 37083804-37096506 protein_coding
ENST00000560702 (MEIS2-016) 36891032-36898339 retained_intron
ENST00000561163 (MEIS2-006) 37036391-37098531 retained_intron
ENST00000561208 (MEIS2-001) 36889204-37099885 protein_coding
ENST00000561264 (MEIS2-024) 36892130-36895278 retained_intron
ENST00000561284 (MEIS2-025) 36892219-36898435 retained_intron
ENST00000561422 (MEIS2-013) 37083770-37094029 retained_intron
ENST00000606653 (MEIS2-031) 37066297-37094565 protein_coding
ENST00000607277 (MEIS2-030) 36895149-37095021 protein_coding
ENSG00000166069 (TMCO5A)
transmembrane and coiled-coil domains 5A 		ENST00000319669 (TMCO5A-001) 37935257-37951539 protein_coding
ENST00000558148 (TMCO5A-007) 37934640-37936949 protein_coding
ENST00000558158 (TMCO5A-004) 37934643-37944426 protein_coding
ENST00000558625 (TMCO5A-006) 37933253-37941194 protein_coding
ENST00000559502 (TMCO5A-005) 37934626-37967724 protein_coding
ENST00000559813 (TMCO5A-003) 37935257-37942387 retained_intron
ENST00000560653 (TMCO5A-008) 37934656-37951285 nonsense_mediated_decay
ENST00000560841 (TMCO5A-009) 37921939-37936918 protein_coding
ENSG00000206676 (Y_RNA)
Y RNA 		ENST00000383949 (Y_RNA.1-598) 37050828-37050930 misc_RNA
ENSG00000243122 (RP11-25H11.1)
 ENST00000476363 (RP11-25H11.1-001) 37490691-37491103 processed_pseudogene
ENSG00000259434 (RP11-720L8.1)
 ENST00000561054 (RP11-720L8.1-001) 37365027-37490808 lincRNA
ENSG00000259460 (RP11-128A17.1)
 ENST00000559509 (RP11-128A17.1-001) 37099339-37100173 antisense
ENSG00000270304 (RP11-597G23.1)
 ENST00000604029 (RP11-597G23.1-001) 37253879-37254952 processed_pseudogene
ENSG00000274216 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000620533 (Metazoa_SRP.1-275) 37216617-37216898 misc_RNA
ENSG00000274444 (RP11-128A17.2)
 ENST00000620584 (RP11-128A17.2-001) 37109587-37109984 lincRNA
CIL_0006QR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027210-ENSMUSG00000027355 CGP 10090 2:115863064-116892494
GeneTranscriptPositionBiotype
ENSMUSG00000027210 (Meis2)
Meis homeobox 2 		ENSMUST00000028639 (Meis2-011) 115863064-116065047 protein_coding
ENSMUST00000074285 (Meis2-014) 115863300-116064512 protein_coding
ENSMUST00000102538 (Meis2-012) 115863064-116065047 protein_coding
ENSMUST00000110906 (Meis2-006) 115863145-116064721 protein_coding
ENSMUST00000110907 (Meis2-001) 115863064-116065839 protein_coding
ENSMUST00000110908 (Meis2-013) 115863064-116065839 protein_coding
ENSMUST00000118654 (Meis2-002) 115864870-115872962 retained_intron
ENSMUST00000120995 (Meis2-003) 115863904-115872943 processed_transcript
ENSMUST00000133990 (Meis2-007) 116049084-116064468 processed_transcript
ENSMUST00000134314 (Meis2-008) 116049084-116062530 processed_transcript
ENSMUST00000135543 (Meis2-009) 116038425-116049212 retained_intron
ENSMUST00000138526 (Meis2-015) 116049107-116058842 retained_intron
ENSMUST00000140461 (Meis2-005) 115996056-116062360 retained_intron
ENSMUST00000149217 (Meis2-016) 115864459-115872943 processed_transcript
ENSMUST00000150477 (Meis2-017) 115866876-115872946 processed_transcript
ENSMUST00000151279 (Meis2-010) 115864273-116042046 processed_transcript
ENSMUST00000154671 (Meis2-004) 115921734-116049680 processed_transcript
ENSMUST00000177493 (Meis2-018) 115864318-115872854 processed_transcript
ENSMUST00000189640 (Meis2-020) 115864227-115868867 retained_intron
ENSMUSG00000027355 (Tmco5)
transmembrane and coiled-coil domains 5 		ENSMUST00000028834 (Tmco5-001) 116878708-116892494 protein_coding
ENSMUST00000123598 (Tmco5-004) 116878691-116892181 protein_coding
ENSMUST00000146144 (Tmco5-003) 116888207-116892494 processed_transcript
ENSMUST00000155470 (Tmco5-002) 116878694-116892137 protein_coding
ENSMUSG00000081787 (Gm13991)
predicted gene 13991 		ENSMUST00000120190 (Gm13991-001) 116527843-116528490 processed_pseudogene
ENSMUSG00000086308 (G630016G05Rik)
RIKEN cDNA G630016G05 gene 		ENSMUST00000152412 (G630016G05Rik-002) 116067225-116085911 lincRNA
ENSMUST00000156095 (G630016G05Rik-001) 116067968-116085910 lincRNA
ENSMUSG00000086328 (2700033N17Rik)
RIKEN cDNA 2700033N17 gene 		ENSMUST00000140185 (2700033N17Rik-001) 116066218-116067444 lincRNA
ENSMUSG00000086462 (Gm13990)
predicted gene 13990 		ENSMUST00000151391 (Gm13990-001) 116848099-116877168 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QR_0001ENSG00000134138ENST00000314177ENST00000338564ENST00000340545ENST00000397620ENST00000397624ENST00000424352ENST00000559085ENST00000559561ENST00000559972ENST00000560570ENST00000560617ENST00000560702ENST00000561163ENST00000561208ENST00000561284ENST00000607277ENSG00000166069ENST00000319669ENST00000558158ENST00000559813ENST00000560653ENST00000560841ENSG00000206676ENST00000383949ENSG00000243122ENST00000476363ENSG00000259434ENST00000561054ENSG00000259460ENST00000559509ENSG00000270304ENST00000604029ENSG00000274216ENST00000620533ENSG00000274444ENST00000620584CIL_0006QR_0002ENSMUSG00000027210ENSMUST00000028639ENSMUST00000074285ENSMUST00000102538ENSMUST00000110906ENSMUST00000110907ENSMUST00000110908ENSMUST00000118654ENSMUST00000120995ENSMUST00000133990ENSMUST00000134314ENSMUST00000140461ENSMUST00000151279ENSMUST00000154671ENSMUST00000177493ENSMUST00000189640ENSMUSG00000027355ENSMUST00000028834ENSMUST00000123598ENSMUST00000146144ENSMUST00000155470ENSMUSG00000081787ENSMUST00000120190ENSMUSG00000086308ENSMUST00000152412ENSMUST00000156095ENSMUSG00000086328ENSMUST00000140185ENSMUSG00000086462ENSMUST00000151391
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134138 ENST00000314177 N/A N/A N/A N/A N/A 7.121±0.00 N/A N/A N/A N/A N/A N/A 1.249±0.71 0.614±0.00
ENST00000338564 N/A N/A N/A 0.810±0.00 0.709±0.00 N/A 0.608±0.00 0.349±0.00 N/A N/A N/A N/A N/A N/A
ENST00000340545 N/A N/A N/A N/A N/A 0.745±0.00 0.830±0.00 N/A 0.673±0.00 N/A N/A 2.336±1.37 1.318±0.13 0.370±0.00
ENST00000397620 N/A N/A N/A N/A 1.371±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000397624 2.433±0.00 N/A N/A 4.221±1.64 1.602±0.00 6.402±5.58 3.627±0.00 2.470±0.00 2.195±1.35 1.633±0.00 0.245±0.00 3.421±1.62 1.782±0.47 1.585±0.00
ENST00000424352 N/A N/A 1.225±0.00 N/A 0.721±0.10 0.668±0.00 0.811±0.00 0.309±0.00 3.426±0.00 N/A N/A N/A 0.760±0.00 N/A
ENST00000557796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.744±0.00 N/A N/A
ENST00000559129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559561 N/A N/A N/A N/A N/A N/A N/A 6.260±0.00 6.944±0.00 N/A N/A 2.162±0.00 2.734±0.00 N/A
ENST00000559972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.447±0.00
ENST00000560570 1.564±0.00 N/A N/A N/A N/A N/A 3.440±0.00 N/A 4.423±0.00 N/A N/A N/A 0.505±0.00 N/A
ENST00000560617 N/A N/A 9.479±0.00 N/A N/A N/A N/A N/A N/A N/A 1.757±0.00 N/A N/A N/A
ENST00000560697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560702 N/A N/A 1.230±0.00 N/A 0.681±0.18 1.098±0.00 0.851±0.00 N/A 4.055±0.00 1.389±0.00 N/A 1.411±0.00 N/A N/A
ENST00000561163 N/A N/A N/A N/A 2.504±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561208 N/A N/A N/A 1.384±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.699±0.00 N/A N/A N/A
ENST00000561422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607277 N/A N/A N/A 6.095±0.00 4.614±0.00 5.963±0.00 5.249±0.00 N/A N/A 5.956±0.00 0.683±0.00 26.374±0.00 N/A N/A
ENSG00000166069 ENST00000319669 N/A N/A N/A N/A N/A 0.056±0.00 N/A N/A N/A 0.104±0.00 N/A 0.086±0.00 N/A 46.210±0.00
ENST00000558148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558158 N/A N/A N/A 0.035±0.00 N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000558625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559502 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559813 N/A 0.096±0.00 N/A N/A N/A N/A N/A N/A N/A 0.150±0.00 N/A N/A N/A N/A
ENST00000560653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.278±0.00
ENST00000560841 0.072±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000206676 ENST00000383949 N/A N/A 497.601±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000243122 ENST00000476363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.065±0.00 N/A N/A 0.339±0.00
ENSG00000259434 ENST00000561054 N/A 0.061±0.00 N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A 0.691±0.25
ENSG00000259460 ENST00000559509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.782±0.00 N/A N/A N/A
ENSG00000270304 ENST00000604029 N/A 0.090±0.00 N/A 0.009±0.00 0.016±0.00 N/A 0.026±0.00 N/A 0.008±0.00 0.007±0.00 0.016±0.00 0.007±0.00 N/A 0.050±0.02
ENSG00000274216 ENST00000620533 0.273±0.00 1.912±0.00 N/A 0.717±0.00 0.965±0.00 0.609±0.00 0.482±0.00 0.820±0.00 0.587±0.00 0.499±0.00 0.128±0.00 0.628±0.50 N/A 0.593±0.00
ENSG00000274444 ENST00000620584 0.078±0.00 0.354±0.00 N/A N/A 0.116±0.00 1.104±0.00 N/A 0.108±0.07 N/A N/A N/A 0.605±0.39 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027210 ENSMUST00000028639 5.665±0.00 20.774±3.40 N/A N/A N/A 0.785±0.12 1.184±0.00 N/A 0.371±0.10 1.154±0.00 0.006±0.00 N/A 0.999±0.00 0.022±0.00
ENSMUST00000074285 1.612±0.22 N/A 3.962±1.00 20.858±10.35 1.214±0.18 0.998±0.30 2.017±1.05 N/A 0.475±0.06 1.319±0.27 0.053±0.00 3.042±0.59 1.242±0.16 0.150±0.09
ENSMUST00000102538 4.694±3.39 15.146±6.86 5.602±1.20 9.838±0.00 1.047±0.03 0.973±0.00 1.667±0.25 3.638±0.49 0.595±0.20 2.368±0.86 0.087±0.06 3.740±0.73 3.424±1.83 0.079±0.05
ENSMUST00000110906 4.727±2.71 11.632±0.66 2.989±0.00 7.834±0.00 0.917±0.41 1.066±0.39 0.956±0.00 2.311±0.41 0.393±0.23 2.103±0.00 0.125±0.00 5.557±0.78 0.952±0.05 0.055±0.00
ENSMUST00000110907 N/A 11.905±0.00 N/A 11.599±4.03 N/A N/A 0.685±0.00 N/A 0.244±0.09 1.404±0.00 0.048±0.00 N/A 1.241±0.00 N/A
ENSMUST00000110908 4.555±3.81 14.127±3.46 4.302±0.47 16.991±11.97 0.844±0.20 1.235±0.18 0.759±0.00 1.709±0.35 0.394±0.18 1.004±0.27 0.067±0.03 3.764±1.76 2.377±1.08 0.186±0.06
ENSMUST00000118654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A
ENSMUST00000120995 N/A N/A N/A N/A 2.331±0.00 N/A N/A N/A N/A N/A N/A N/A 14.255±0.00 N/A
ENSMUST00000133990 N/A 54.130±0.00 N/A N/A N/A N/A N/A N/A 0.396±0.00 N/A N/A N/A N/A N/A
ENSMUST00000134314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.246±0.00 N/A N/A N/A
ENSMUST00000135543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140461 N/A N/A N/A N/A N/A N/A N/A N/A 0.138±0.01 N/A N/A N/A N/A 0.016±0.00
ENSMUST00000149217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151279 N/A N/A N/A N/A N/A N/A 2.816±0.00 N/A N/A N/A 0.183±0.00 N/A N/A 0.501±0.00
ENSMUST00000154671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.574±0.25
ENSMUST00000177493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.138±0.00 N/A N/A N/A
ENSMUST00000189640 N/A N/A N/A N/A N/A 5.131±0.76 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027355 ENSMUST00000028834 N/A N/A N/A 0.103±0.00 N/A N/A N/A N/A N/A N/A N/A 0.090±0.00 N/A 42.707±12.85
ENSMUST00000123598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 344.243±0.00
ENSMUST00000146144 0.094±0.00 0.237±0.00 N/A 0.060±0.00 0.201±0.00 N/A N/A 0.217±0.02 N/A N/A N/A 0.079±0.00 N/A 115.315±3.98
ENSMUST00000155470 N/A N/A N/A 1.578±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 682.579±0.00
ENSMUSG00000081787 ENSMUST00000120190 2.506±0.89 0.252±0.14 0.264±0.13 0.466±0.25 0.649±0.23 0.134±0.00 0.556±0.43 0.580±0.36 0.379±0.22 0.840±0.31 0.129±0.05 2.639±1.76 0.086±0.05 0.235±0.12
ENSMUSG00000086308 ENSMUST00000152412 N/A N/A N/A 1.036±0.00 N/A N/A N/A N/A N/A N/A N/A 0.258±0.00 0.089±0.00 0.050±0.00
ENSMUST00000156095 N/A 2.947±0.50 0.118±0.02 0.878±0.00 0.090±0.06 0.153±0.07 N/A 0.069±0.00 0.026±0.01 0.123±0.00 0.006±0.00 0.248±0.09 0.041±0.02 0.013±0.00
ENSMUSG00000086328 ENSMUST00000140185 3.325±2.15 13.760±5.10 3.307±0.13 4.937±0.00 0.569±0.20 1.123±0.32 0.719±0.29 1.683±0.42 0.422±0.27 0.940±0.34 0.082±0.03 2.592±1.05 1.351±0.65 0.095±0.04
ENSMUSG00000086462 ENSMUST00000151391 N/A N/A N/A 0.011±0.00 N/A N/A N/A N/A N/A N/A N/A 0.143±0.06 N/A 0.153±0.07

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