C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 2810403D21 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000086629 2810403D21Rik 10090 + X:108834478-108974906 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000123040 2810403D21Rik-007 108834578-108974398 processed_transcript
  ENSMUST00000124329 2810403D21Rik-001 108903386-108974906 processed_transcript
  ENSMUST00000131640 2810403D21Rik-003 108834657-108886683 processed_transcript
  ENSMUST00000144421 2810403D21Rik-006 108834502-108886690 processed_transcript
  ENSMUST00000145250 2810403D21Rik-004 108834664-108839502 retained_intron
  ENSMUST00000151166 2810403D21Rik-008 108834695-108874974 processed_transcript
  ENSMUST00000152089 2810403D21Rik-005 108834679-108874770 processed_transcript
  ENSMUST00000153212 2810403D21Rik-002 108834478-108886896 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000123040ENSMUST00000124329ENSMUST00000131640ENSMUST00000144421ENSMUST00000145250ENSMUST00000151166ENSMUST00000152089ENSMUST00000153212
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000123040 0.576±0.00 0.466±0.00 0.825±0.00 N/A 0.348±0.07 0.340±0.00 N/A 0.632±0.28 N/A 0.410±0.00 N/A N/A N/A 0.102±0.00
ENSMUST00000124329 0.081±0.01 0.190±0.00 0.230±0.02 0.213±0.00 0.167±0.07 0.080±0.00 0.068±0.00 0.093±0.03 0.134±0.08 0.088±0.00 0.201±0.02 0.213±0.06 0.637±0.49 0.064±0.05
ENSMUST00000131640 0.611±0.00 0.734±0.27 1.268±0.08 1.110±0.33 0.400±0.15 N/A 0.378±0.13 0.449±0.02 1.126±0.61 1.078±0.00 0.820±0.42 1.777±1.13 0.897±0.06 N/A
ENSMUST00000144421 N/A 0.318±0.00 N/A N/A 0.574±0.28 0.231±0.00 N/A 0.385±0.14 0.281±0.10 0.307±0.14 N/A 0.716±0.00 0.851±0.00 0.229±0.14
ENSMUST00000145250 0.059±0.01 0.086±0.03 0.103±0.00 0.049±0.01 0.069±0.01 0.061±0.02 0.030±0.01 0.069±0.02 0.055±0.03 0.035±0.02 N/A 0.130±0.04 0.072±0.02 0.029±0.01
ENSMUST00000151166 0.192±0.13 0.246±0.00 0.402±0.05 0.251±0.00 N/A N/A 0.218±0.04 0.208±0.05 0.338±0.11 0.143±0.00 0.199±0.04 N/A 0.466±0.08 0.052±0.00
ENSMUST00000152089 0.246±0.00 N/A N/A N/A N/A 0.285±0.00 N/A N/A 0.186±0.06 N/A N/A 0.750±0.03 0.573±0.18 N/A
ENSMUST00000153212 0.173±0.02 N/A 0.314±0.00 0.358±0.00 0.137±0.00 N/A 0.229±0.07 0.317±0.12 0.378±0.21 0.194±0.02 0.185±0.03 0.586±0.22 0.386±0.00 0.077±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KC CIL_0003KC_0002 CGP X:108737016-109013404

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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