C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA A830082K12 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000087143 A830082K12Rik 10090 + 13:78198017-78279391 antisense
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000123998 A830082K12Rik-002 78202374-78236564 antisense
  ENSMUST00000131564 A830082K12Rik-004 78201984-78234713 antisense
  ENSMUST00000134705 A830082K12Rik-005 78202553-78231386 antisense
  ENSMUST00000137199 A830082K12Rik-007 78199738-78200515 antisense
  ENSMUST00000144545 A830082K12Rik-003 78199778-78231977 antisense
  ENSMUST00000145613 A830082K12Rik-001 78198017-78235733 antisense
  ENSMUST00000183171 A830082K12Rik-006 78202787-78279391 antisense

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverMuscleOvaryPlacentaTestisENSMUST00000123998ENSMUST00000134705ENSMUST00000137199ENSMUST00000144545ENSMUST00000145613ENSMUST00000183171
Transcript ID Breast Liver Muscle Ovary Placenta Testis
ENSMUST00000123998 0.187±0.00 0.216±0.03 0.073±0.03 N/A 0.052±0.03 0.075±0.04
ENSMUST00000134705 N/A N/A 0.378±0.00 N/A N/A N/A
ENSMUST00000137199 N/A N/A 0.170±0.00 1.458±0.00 N/A N/A
ENSMUST00000144545 N/A N/A 0.086±0.00 N/A N/A N/A
ENSMUST00000145613 N/A 0.398±0.01 0.089±0.02 0.651±0.00 N/A N/A
ENSMUST00000183171 N/A N/A N/A N/A N/A 0.051±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007N1 CIL_0007N1_0005 UCNEbase 13:76802395-80648053
CIL_00083A CIL_00083A_0002 VISTA 13:78023865-78625614
CIL_0008KX CIL_0008KX_0002 VISTA 13:78144587-78747858

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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