C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 2010001A14 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000087165 2010001A14Rik 10090 - 11:57795499-57801417 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000132378 2010001A14Rik-002 57795519-57801414 processed_transcript
  ENSMUST00000140069 2010001A14Rik-003 57795606-57801398 processed_transcript
  ENSMUST00000152790 2010001A14Rik-001 57795499-57801417 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000132378ENSMUST00000140069ENSMUST00000152790
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000132378 0.942±0.29 0.525±0.06 1.016±0.00 N/A 0.874±0.17 1.430±0.16 0.275±0.15 3.322±0.74 0.816±0.27 0.600±0.00 0.338±0.08 1.247±0.96 0.540±0.10 0.798±0.00
ENSMUST00000140069 0.653±0.00 0.522±0.05 1.895±0.09 N/A 0.762±0.00 0.908±0.24 0.454±0.17 1.295±0.10 0.541±0.19 N/A 0.469±0.33 1.411±1.05 0.577±0.06 0.341±0.02
ENSMUST00000152790 1.585±0.47 0.815±0.36 1.876±0.27 0.653±0.00 0.900±0.58 1.725±0.89 0.756±0.15 3.326±0.71 1.394±0.52 1.142±0.32 0.460±0.11 1.547±0.83 0.800±0.38 1.082±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009C8 CIL_0009C8_0002 VISTA 11:57350678-57952744
CIL_00094E CIL_00094E_0002 VISTA 11:57350713-57952688
CIL_00099I CIL_00099I_0002 VISTA 11:57547462-58147793
CIL_00088D CIL_00088D_0002 VISTA 11:57627590-58231336
CIL_0001UJ CIL_0001UJ_0002 CGP 11:57645442-57810217

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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