C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001UJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164574-ENSG00000164576 CGP 9606 5:154190730-154461054
GeneTranscriptPositionBiotype
ENSG00000037749 (MFAP3)
microfibrillar-associated protein 3 		ENST00000322602 (MFAP3-001) 154038993-154055033 protein_coding
ENST00000439768 (MFAP3-003) 154038959-154054052 protein_coding
ENST00000518497 (MFAP3-011) 154097023-154149940 processed_transcript
ENST00000519325 (MFAP3-012) 154097023-154220478 processed_transcript
ENST00000519612 (MFAP3-009) 154097023-154149947 processed_transcript
ENST00000519928 (MFAP3-006) 154049602-154053002 processed_transcript
ENST00000520327 (MFAP3-007) 154038968-154149947 processed_transcript
ENST00000520899 (MFAP3-005) 154038999-154049772 protein_coding
ENST00000521527 (MFAP3-008) 154038974-154135481 processed_transcript
ENST00000522177 (MFAP3-004) 154038994-154052952 protein_coding
ENST00000522440 (MFAP3-010) 154097023-154122021 processed_transcript
ENST00000522782 (MFAP3-002) 154038906-154052995 protein_coding
ENSG00000164574 (GALNT10)
polypeptide N-acetylgalactosaminyltransferase 10 		ENST00000297107 (GALNT10-001) 154190730-154420984 protein_coding
ENST00000377661 (GALNT10-003) 154190774-154419031 protein_coding
ENST00000425427 (GALNT10-005) 154190730-154389581 protein_coding
ENST00000517958 (GALNT10-002) 154403777-154419033 retained_intron
ENST00000519235 (GALNT10-010) 154402790-154409639 processed_transcript
ENST00000519544 (GALNT10-009) 154376317-154406256 processed_transcript
ENST00000519571 (GALNT10-008) 154287470-154376367 processed_transcript
ENST00000520647 (GALNT10-004) 154190735-154419012 nonsense_mediated_decay
ENST00000521781 (GALNT10-007) 154190997-154376420 processed_transcript
ENST00000521786 (GALNT10-006) 154190748-154219674 processed_transcript
ENSG00000164576 (SAP30L)
SAP30-like 		ENST00000297109 (SAP30L-001) 154445957-154461054 protein_coding
ENST00000426761 (SAP30L-004) 154446545-154456331 protein_coding
ENST00000440364 (SAP30L-003) 154446545-154456331 protein_coding
ENST00000517926 (SAP30L-002) 154453078-154456268 retained_intron
ENST00000519683 (SAP30L-007) 154446622-154451316 retained_intron
ENST00000520159 (SAP30L-006) 154446554-154453485 processed_transcript
ENST00000520731 (SAP30L-009) 154452443-154456149 processed_transcript
ENST00000523029 (SAP30L-008) 154452398-154456149 retained_intron
ENST00000523198 (SAP30L-005) 154446545-154455968 processed_transcript
ENSG00000241963 (RN7SL655P)
RNA, 7SL, cytoplasmic 655, pseudogene 		ENST00000486087 (RN7SL655P-201) 154349428-154349725 misc_RNA
ENSG00000245275 (SAP30L-AS1)
SAP30L antisense RNA 1 (head to head) 		ENST00000501280 (SAP30L-AS1-004) 154436001-154445850 antisense
ENST00000519727 (SAP30L-AS1-001) 154329437-154445819 antisense
ENST00000522312 (SAP30L-AS1-003) 154442997-154445822 antisense
ENST00000524264 (SAP30L-AS1-002) 154392171-154445813 antisense
ENSG00000253119 (HNRNPA3P7)
heterogeneous nuclear ribonucleoprotein A3 pseudogene 7 		ENST00000521638 (HNRNPA3P7-001) 154337471-154338452 processed_pseudogene
CIL_0001UJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020520-ENSMUSG00000020519 CGP 10090 11:57645442-57810217
GeneTranscriptPositionBiotype
ENSMUSG00000020519 (Sap30l)
SAP30-like 		ENSMUST00000020826 (Sap30l-001) 57801637-57810217 protein_coding
ENSMUSG00000020520 (Galnt10)
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 		ENSMUST00000066987 (Galnt10-001) 57645442-57787514 protein_coding
ENSMUST00000108846 (Galnt10-002) 57645465-57726911 protein_coding
ENSMUSG00000065806 (n-R5s69)
nuclear encoded rRNA 5S 69 		ENSMUST00000083872 (n-R5s69-201) 57764427-57764545 rRNA
ENSMUSG00000077155 (Gm24582)
predicted gene, 24582 		ENSMUST00000103967 (Gm24582-201) 57741300-57741402 snRNA
ENSMUSG00000085719 (4933424L21Rik)
RIKEN cDNA 4933424L21 gene 		ENSMUST00000142486 (4933424L21Rik-001) 57623698-57649494 antisense
ENSMUSG00000086933 (4933426K07Rik)
RIKEN cDNA 4933426K07 gene 		ENSMUST00000143009 (4933426K07Rik-001) 57655415-57657826 antisense
ENSMUSG00000087165 (2010001A14Rik)
RIKEN cDNA 2010001A14 gene 		ENSMUST00000132378 (2010001A14Rik-002) 57795519-57801414 processed_transcript
ENSMUST00000140069 (2010001A14Rik-003) 57795606-57801398 processed_transcript
ENSMUST00000152790 (2010001A14Rik-001) 57795499-57801417 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001UJ_0001ENSG00000037749ENST00000322602ENSG00000164574ENST00000297107ENST00000425427ENSG00000164576ENST00000297109ENST00000440364ENST00000519683ENST00000520159ENST00000520731ENSG00000241963ENST00000486087ENSG00000245275ENST00000501280ENST00000519727ENST00000522312ENST00000524264ENSG00000253119ENST00000521638CIL_0001UJ_0002ENSMUSG00000020519ENSMUST00000020826ENSMUSG00000020520ENSMUST00000066987ENSMUST00000108846ENSMUSG00000065806ENSMUST00000083872ENSMUSG00000077155ENSMUST00000103967ENSMUSG00000085719ENSMUST00000142486ENSMUSG00000086933ENSMUST00000143009ENSMUSG00000087165ENSMUST00000132378ENSMUST00000140069ENSMUST00000152790
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000037749 ENST00000322602 N/A 4.639±0.00 N/A 2.676±0.00 N/A N/A N/A N/A 1.808±0.00 N/A N/A 1.202±0.00 3.481±0.10 5.654±0.00
ENST00000439768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164574 ENST00000297107 6.228±0.00 3.090±0.00 2.053±0.00 2.990±1.53 4.165±0.00 5.412±3.49 3.252±0.00 8.677±0.00 2.048±0.20 7.572±0.00 2.007±0.00 22.694±15.47 2.735±0.13 5.243±1.75
ENST00000377661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425427 N/A N/A 1.323±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164576 ENST00000297109 6.117±0.00 2.935±0.00 0.942±0.00 3.317±2.34 3.653±1.92 5.566±3.55 3.438±2.81 3.717±2.93 2.470±0.29 2.963±1.69 3.189±2.02 4.468±4.02 3.388±0.91 5.583±2.62
ENST00000426761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.516±0.00 N/A N/A N/A
ENST00000517926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519683 N/A N/A N/A N/A N/A N/A N/A 6.045±0.00 N/A N/A N/A N/A N/A N/A
ENST00000520159 N/A N/A N/A N/A N/A N/A 1.526±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000520731 N/A N/A N/A N/A N/A 6.731±0.00 N/A N/A 6.128±0.00 N/A N/A 11.201±0.00 17.589±0.00 51.825±0.00
ENST00000523029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000241963 ENST00000486087 0.057±0.00 0.176±0.00 N/A 0.129±0.00 N/A 0.111±0.00 0.286±0.00 0.121±0.00 N/A N/A N/A 0.744±0.00 N/A 0.054±0.00
ENSG00000245275 ENST00000501280 0.485±0.00 0.506±0.00 N/A N/A N/A N/A 0.321±0.19 0.228±0.00 N/A 0.223±0.00 N/A 0.089±0.01 0.151±0.00 0.447±0.21
ENST00000519727 N/A N/A N/A N/A 0.316±0.00 0.397±0.00 0.288±0.00 N/A N/A 0.185±0.00 N/A 0.199±0.05 N/A 0.446±0.00
ENST00000522312 0.102±0.00 0.553±0.00 N/A 0.238±0.00 N/A 0.353±0.00 0.097±0.00 0.532±0.00 0.156±0.00 0.073±0.00 N/A N/A N/A 0.426±0.14
ENST00000524264 0.072±0.00 1.042±0.00 0.970±0.00 0.345±0.00 1.414±0.83 0.960±0.75 0.055±0.02 0.933±0.00 0.855±0.79 1.087±1.03 N/A 0.887±1.09 0.214±0.00 0.503±0.16
ENSG00000253119 ENST00000521638 0.107±0.00 0.112±0.00 N/A 0.073±0.04 0.215±0.07 0.052±0.00 0.017±0.00 0.028±0.00 0.101±0.00 0.027±0.00 0.012±0.00 0.146±0.00 N/A 0.025±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020519 ENSMUST00000020826 13.441±1.41 29.487±7.23 12.355±0.52 15.144±7.98 9.436±3.00 19.228±3.96 8.976±0.86 19.296±2.33 8.622±2.01 12.600±1.79 13.633±2.88 22.411±4.47 29.355±12.26 2.342±0.31
ENSMUSG00000020520 ENSMUST00000066987 6.478±0.76 18.757±2.13 7.395±0.57 4.002±1.98 6.409±3.10 34.525±5.64 1.986±0.16 4.963±0.14 5.151±4.22 3.851±0.63 1.428±0.41 13.190±2.03 5.493±0.88 9.719±2.86
ENSMUST00000108846 N/A N/A N/A N/A 0.624±0.00 N/A N/A N/A 2.398±1.61 N/A 0.447±0.00 N/A N/A N/A
ENSMUSG00000065806 ENSMUST00000083872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 594.372±578.69
ENSMUSG00000077155 ENSMUST00000103967 N/A N/A N/A N/A N/A N/A N/A N/A 35.443±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000085719 ENSMUST00000142486 0.048±0.02 0.093±0.01 N/A N/A 0.102±0.06 0.068±0.00 0.039±0.01 N/A 0.010±0.00 0.039±0.00 0.048±0.01 0.074±0.03 0.034±0.00 2.960±0.00
ENSMUSG00000086933 ENSMUST00000143009 0.034±0.01 0.071±0.02 0.012±0.01 0.037±0.01 0.104±0.04 0.125±0.03 0.026±0.01 0.025±0.01 0.043±0.02 0.036±0.02 0.022±0.01 0.071±0.03 0.020±0.00 3.663±0.92
ENSMUSG00000087165 ENSMUST00000132378 0.942±0.29 0.525±0.06 1.016±0.00 N/A 0.874±0.17 1.430±0.16 0.275±0.15 3.322±0.74 0.816±0.27 0.600±0.00 0.338±0.08 1.247±0.96 0.540±0.10 0.798±0.00
ENSMUST00000140069 0.653±0.00 0.522±0.05 1.895±0.09 N/A 0.762±0.00 0.908±0.24 0.454±0.17 1.295±0.10 0.541±0.19 N/A 0.469±0.33 1.411±1.05 0.577±0.06 0.341±0.02
ENSMUST00000152790 1.585±0.47 0.815±0.36 1.876±0.27 0.653±0.00 0.900±0.58 1.725±0.89 0.756±0.15 3.326±0.71 1.394±0.52 1.142±0.32 0.460±0.11 1.547±0.83 0.800±0.38 1.082±0.16

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