C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA A930011G23 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000089809 A930011G23Rik 10090 - 5:99297244-99729065 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000142639 A930011G23Rik-002 99556527-99729065 retained_intron
  ENSMUST00000146396 A930011G23Rik-003 99297244-99729045 protein_coding
  ENSMUST00000160803 A930011G23Rik-005 99680247-99728821 processed_transcript
  ENSMUST00000161148 A930011G23Rik-004 99723455-99729056 protein_coding
  ENSMUST00000161516 A930011G23Rik-001 99375026-99729062 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000142639ENSMUST00000146396ENSMUST00000160803ENSMUST00000161148ENSMUST00000161516
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000142639 0.074±0.00 0.088±0.04 0.013±0.00 0.089±0.00 N/A N/A 0.028±0.01 0.035±0.00 0.070±0.00 0.058±0.01 N/A 0.224±0.11 0.012±0.00 0.060±0.00
ENSMUST00000146396 0.061±0.03 N/A 0.020±0.00 N/A 0.011±0.00 0.118±0.02 0.032±0.00 0.015±0.00 0.030±0.03 0.012±0.00 N/A 0.054±0.08 0.012±0.00 N/A
ENSMUST00000160803 0.344±0.00 N/A N/A N/A N/A N/A 0.137±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161148 0.130±0.03 N/A 0.021±0.01 0.116±0.00 0.033±0.01 0.023±0.00 0.102±0.00 0.163±0.07 0.007±0.00 0.034±0.01 0.011±0.00 0.113±0.07 0.021±0.01 N/A
ENSMUST00000161516 0.074±0.00 N/A 0.009±0.00 0.084±0.00 0.036±0.00 0.044±0.01 0.033±0.02 0.081±0.06 0.017±0.01 0.015±0.00 N/A 0.142±0.12 0.026±0.00 0.988±0.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G8 CIL_0008G8_0002 VISTA 5:99067893-99670406

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

No Homologs available.

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