C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA A530032D15Rik gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000089844 A530032D15Rik 10090 - 1:85083069-85109853 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000160792 A530032D15Rik-001 85088407-85109853 protein_coding
  ENSMUST00000161675 A530032D15Rik-003 85099477-85109846 protein_coding
  ENSMUST00000161724 A530032D15Rik-002 85083069-85109449 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000160792ENSMUST00000161724
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000160792 N/A 0.184±0.00 N/A N/A 0.474±0.32 0.117±0.05 N/A N/A 0.055±0.02 N/A 0.079±0.00 N/A N/A 0.051±0.00
ENSMUST00000161724 2.467±1.34 2.906±0.56 4.753±1.87 4.247±0.12 3.008±1.42 0.935±0.52 3.301±0.28 2.842±0.54 1.960±0.87 5.091±1.66 0.691±0.14 7.211±2.38 1.850±1.12 0.366±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AU CIL_0004AU_0006 CGP 1:84992690-85270566

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038133 zgc:113411 zgc:113411 protein_coding Danio_rerio
ENSDARG00000055359 BX569789.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090449 BX569789.4 Uncharacterized protein protein_coding Danio_rerio
ENSG00000079263 SP140 SP140 nuclear body protein protein_coding Homo_sapiens

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