C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hippocampus abundant gene transcript 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000089911 Hiat1 10090 - 3:116631164-116681260 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029570 Hiat1-001 116631164-116662677 protein_coding
  ENSMUST00000130631 Hiat1-004 116641300-116645732 retained_intron
  ENSMUST00000138418 Hiat1-003 116648118-116662491 retained_intron
  ENSMUST00000140672 Hiat1-005 116641902-116681260 protein_coding
  ENSMUST00000150402 Hiat1-002 116651027-116662610 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029570ENSMUST00000130631
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029570 13.092±0.66 11.273±1.40 18.467±1.00 12.122±5.20 10.496±2.04 13.296±2.03 6.757±0.36 15.968±1.30 12.282±4.34 18.375±2.17 4.262±0.47 13.575±3.57 15.317±8.64 30.760±12.82
ENSMUST00000130631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.146±1.70 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043055 hiat1b hippocampus abundant transcript 1b protein_coding Danio_rerio
ENSG00000156875 HIAT1 hippocampus abundant transcript 1 protein_coding Homo_sapiens

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