C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hippocampus abundant gene transcript 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029570 Hiat1-001 ENSMUSG00000089911 10090 - 3:116631164-116662677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029570
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029570 13.092±0.66 11.273±1.40 18.467±1.00 12.122±5.20 10.496±2.04 13.296±2.03 6.757±0.36 15.968±1.30 12.282±4.34 18.375±2.17 4.262±0.47 13.575±3.57 15.317±8.64 30.760±12.82

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000122349 hiat1b-001 protein_coding Danio_rerio 0 717
ENSDART00000063207 hiat1b-201 protein_coding Danio_rerio 0 708
ENST00000370152 HIAT1-001 protein_coding Homo_sapiens 0 3325
ENST00000421661 HIAT1-002 protein_coding Homo_sapiens 0 448

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