C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Mir99a and Mirlet7c-1 host gene (non-protein coding)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000090386 2810055G20Rik 10090 + 16:77236317-77691403 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000068704 2810055G20Rik-009 77500216-77598531 lincRNA
  ENSMUST00000170849 2810055G20Rik-005 77329259-77598444 lincRNA
  ENSMUST00000182091 2810055G20Rik-015 77679899-77691397 lincRNA
  ENSMUST00000182398 2810055G20Rik-011 77236319-77596954 lincRNA
  ENSMUST00000182548 2810055G20Rik-012 77329188-77360815 lincRNA
  ENSMUST00000182601 2810055G20Rik-004 77329205-77594924 lincRNA
  ENSMUST00000182656 2810055G20Rik-001 77236317-77598423 lincRNA
  ENSMUST00000182748 2810055G20Rik-007 77329328-77558428 lincRNA
  ENSMUST00000182820 2810055G20Rik-006 77329504-77691399 lincRNA
  ENSMUST00000182986 2810055G20Rik-014 77594366-77594967 lincRNA
  ENSMUST00000183099 2810055G20Rik-003 77329180-77680187 lincRNA
  ENSMUST00000183166 2810055G20Rik-016 77670355-77691397 lincRNA
  ENSMUST00000183327 2810055G20Rik-013 77500384-77691403 lincRNA
  ENSMUST00000183333 2810055G20Rik-002 77236317-77363679 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068704ENSMUST00000170849ENSMUST00000182548ENSMUST00000182601ENSMUST00000182656ENSMUST00000182748ENSMUST00000182820ENSMUST00000182986ENSMUST00000183099ENSMUST00000183327ENSMUST00000183333
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068704 N/A 0.297±0.16 1.384±0.00 8.403±8.14 0.511±0.18 N/A N/A N/A 0.065±0.00 0.516±0.00 0.201±0.07 0.647±0.06 0.118±0.07 N/A
ENSMUST00000170849 N/A N/A N/A 0.293±0.00 0.404±0.00 N/A N/A N/A 0.159±0.11 N/A 0.218±0.07 1.054±0.00 0.015±0.00 N/A
ENSMUST00000182548 N/A N/A N/A N/A N/A 0.220±0.07 N/A N/A N/A N/A N/A N/A 0.103±0.03 N/A
ENSMUST00000182601 1.253±0.48 0.358±0.13 N/A N/A 0.715±0.25 0.177±0.00 N/A 0.919±0.26 0.418±0.18 0.698±0.06 N/A 1.100±0.22 N/A 1.558±0.12
ENSMUST00000182656 N/A N/A N/A 16.031±0.00 N/A N/A N/A N/A N/A N/A 0.210±0.02 N/A N/A N/A
ENSMUST00000182748 N/A N/A N/A 9.983±0.00 0.715±0.00 0.066±0.00 N/A N/A N/A 0.219±0.00 N/A N/A N/A N/A
ENSMUST00000182820 N/A N/A N/A N/A N/A 0.330±0.00 1.277±0.00 0.851±0.10 0.172±0.01 N/A 0.643±0.16 N/A N/A 2.813±0.42
ENSMUST00000182986 N/A 0.760±0.20 N/A N/A 1.166±0.23 N/A N/A N/A N/A 1.099±0.00 N/A N/A N/A N/A
ENSMUST00000183099 N/A 0.200±0.00 N/A N/A 0.392±0.06 N/A N/A N/A 0.193±0.08 N/A N/A N/A N/A N/A
ENSMUST00000183327 2.197±0.00 N/A N/A N/A N/A N/A 3.610±0.60 N/A 0.218±0.02 N/A N/A N/A 0.223±0.00 N/A
ENSMUST00000183333 N/A 0.230±0.11 N/A 12.029±11.92 0.441±0.09 0.157±0.08 N/A 0.239±0.00 0.134±0.06 0.191±0.06 N/A 0.476±0.21 0.091±0.08 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083Q CIL_00083Q_0002 VISTA 16:76989984-77593024
CIL_0008LQ CIL_0008LQ_0002 VISTA 16:77120896-77722638

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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