C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00083Q_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1377 VISTA 9606 21:15853904-16455783
GeneTranscriptPositionBiotype
ENSG00000155313 (USP25)
ubiquitin specific peptidase 25 		ENST00000285679 (USP25-002) 15730025-15878911 protein_coding
ENST00000285681 (USP25-001) 15730025-15880058 protein_coding
ENST00000351097 (USP25-003) 15730025-15878911 protein_coding
ENST00000400183 (USP25-201) 15730025-15880069 protein_coding
ENST00000449491 (USP25-006) 15842518-15874518 protein_coding
ENST00000453553 (USP25-005) 15825010-15833379 protein_coding
ENST00000464435 (USP25-007) 15799534-15805655 retained_intron
ENST00000478932 (USP25-004) 15875996-15878911 retained_intron
ENST00000547201 (USP25-008) 15773256-15818729 processed_transcript
ENST00000549362 (USP25-009) 15773256-15818729 processed_transcript
ENSG00000214976 (VDAC2P1)
voltage-dependent anion channel 2 pseudogene 1 		ENST00000399358 (VDAC2P1-001) 16094415-16095372 processed_pseudogene
ENSG00000270071 (AP001172.2)
 ENST00000602921 (AP001172.2-001) 16291791-16308133 lincRNA
ENSG00000270139 (AP001172.3)
 ENST00000602454 (AP001172.3-001) 16417139-16419080 lincRNA
CIL_00083Q_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1377 VISTA 10090 16:76989984-77593024
GeneTranscriptPositionBiotype
ENSMUSG00000022867 (Usp25)
ubiquitin specific peptidase 25 		ENSMUST00000023580 (Usp25-201) 77014069-77116779 protein_coding
ENSMUSG00000090386 (2810055G20Rik)
Mir99a and Mirlet7c-1 host gene (non-protein coding) 		ENSMUST00000068704 (2810055G20Rik-009) 77500216-77598531 lincRNA
ENSMUST00000170849 (2810055G20Rik-005) 77329259-77598444 lincRNA
ENSMUST00000182091 (2810055G20Rik-015) 77679899-77691397 lincRNA
ENSMUST00000182398 (2810055G20Rik-011) 77236319-77596954 lincRNA
ENSMUST00000182548 (2810055G20Rik-012) 77329188-77360815 lincRNA
ENSMUST00000182601 (2810055G20Rik-004) 77329205-77594924 lincRNA
ENSMUST00000182656 (2810055G20Rik-001) 77236317-77598423 lincRNA
ENSMUST00000182748 (2810055G20Rik-007) 77329328-77558428 lincRNA
ENSMUST00000182820 (2810055G20Rik-006) 77329504-77691399 lincRNA
ENSMUST00000182986 (2810055G20Rik-014) 77594366-77594967 lincRNA
ENSMUST00000183099 (2810055G20Rik-003) 77329180-77680187 lincRNA
ENSMUST00000183166 (2810055G20Rik-016) 77670355-77691397 lincRNA
ENSMUST00000183327 (2810055G20Rik-013) 77500384-77691403 lincRNA
ENSMUST00000183333 (2810055G20Rik-002) 77236317-77363679 lincRNA
ENSMUSG00000096870 (Gm21816)
predicted gene, 21816 		ENSMUST00000179255 (Gm21816-201) 77400847-77401208 pseudogene
ENSMUSG00000100857 (RP23-282P1.1)
RIKEN cDNA 1700041M19 gene 		ENSMUST00000190317 (RP23-282P1.1-002) 77007059-77010881 lincRNA
ENSMUST00000190908 (RP23-282P1.1-001) 77004228-77010875 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00083Q_0001ENSG00000155313ENST00000285679ENST00000285681ENST00000351097ENST00000400183ENST00000449491ENST00000453553ENST00000464435ENST00000478932ENST00000547201ENST00000549362ENSG00000214976ENST00000399358ENSG00000270071ENST00000602921ENSG00000270139ENST00000602454CIL_00083Q_0002ENSMUSG00000022867ENSMUST00000023580ENSMUSG00000090386ENSMUST00000068704ENSMUST00000170849ENSMUST00000182091ENSMUST00000182398ENSMUST00000182548ENSMUST00000182601ENSMUST00000182656ENSMUST00000182748ENSMUST00000182820ENSMUST00000182986ENSMUST00000183099ENSMUST00000183166ENSMUST00000183327ENSMUST00000183333ENSMUSG00000096870ENSMUST00000179255ENSMUSG00000100857ENSMUST00000190317ENSMUST00000190908
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00083Q_0001ENSG00000155313ENST00000285679ENST00000285681ENST00000351097ENST00000400183ENST00000478932ENSG00000214976ENST00000399358ENSG00000270071ENST00000602921ENSG00000270139ENST00000602454CIL_00083Q_0002ENSMUSG00000022867ENSMUST00000023580ENSMUSG00000090386ENSMUST00000068704ENSMUST00000170849ENSMUST00000182548ENSMUST00000182601ENSMUST00000182656ENSMUST00000182748ENSMUST00000182820ENSMUST00000182986ENSMUST00000183099ENSMUST00000183327ENSMUST00000183333ENSMUSG00000096870ENSMUST00000179255ENSMUSG00000100857ENSMUST00000190317ENSMUST00000190908
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000155313 ENST00000285679 9.658±0.00 7.252±0.00 3.540±0.00 8.524±0.64 9.337±0.00 5.491±1.44 6.320±3.39 5.943±2.24 5.512±2.61 8.593±1.18 15.673±9.34 7.533±3.29 9.944±7.09 26.033±9.72
ENST00000285681 1.788±0.00 N/A N/A 1.115±0.00 1.329±0.38 1.208±0.00 N/A 0.611±0.00 1.786±0.00 1.681±0.85 N/A 0.703±0.00 1.016±0.00 1.688±0.00
ENST00000351097 N/A N/A 4.703±0.00 N/A 3.283±0.00 4.240±0.00 1.965±0.00 1.957±0.00 N/A N/A 5.156±0.00 3.859±0.00 N/A N/A
ENST00000400183 N/A N/A N/A N/A N/A 1.756±0.00 1.163±0.49 N/A N/A N/A 4.753±0.00 N/A N/A N/A
ENST00000449491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478932 N/A N/A N/A N/A 3.269±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214976 ENST00000399358 0.012±0.00 N/A N/A 0.191±0.00 N/A N/A N/A N/A 0.148±0.00 N/A 0.020±0.00 N/A N/A N/A
ENSG00000270071 ENST00000602921 0.020±0.00 0.258±0.00 N/A 0.715±0.35 0.206±0.00 0.552±0.45 0.054±0.00 2.287±2.10 0.016±0.00 0.077±0.00 0.201±0.00 0.184±0.00 N/A 0.180±0.05
ENSG00000270139 ENST00000602454 N/A N/A 0.342±0.00 0.029±0.00 N/A 0.238±0.00 N/A N/A N/A N/A 2.582±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022867 ENSMUST00000023580 10.037±2.51 11.241±0.80 12.885±0.61 3.963±1.21 13.233±3.90 8.119±3.11 6.888±2.72 10.393±2.32 13.933±11.69 16.105±4.44 11.949±6.17 9.486±2.73 11.741±2.87 19.784±7.44
ENSMUSG00000090386 ENSMUST00000068704 N/A 0.297±0.16 1.384±0.00 8.403±8.14 0.511±0.18 N/A N/A N/A 0.065±0.00 0.516±0.00 0.201±0.07 0.647±0.06 0.118±0.07 N/A
ENSMUST00000170849 N/A N/A N/A 0.293±0.00 0.404±0.00 N/A N/A N/A 0.159±0.11 N/A 0.218±0.07 1.054±0.00 0.015±0.00 N/A
ENSMUST00000182091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182548 N/A N/A N/A N/A N/A 0.220±0.07 N/A N/A N/A N/A N/A N/A 0.103±0.03 N/A
ENSMUST00000182601 1.253±0.48 0.358±0.13 N/A N/A 0.715±0.25 0.177±0.00 N/A 0.919±0.26 0.418±0.18 0.698±0.06 N/A 1.100±0.22 N/A 1.558±0.12
ENSMUST00000182656 N/A N/A N/A 16.031±0.00 N/A N/A N/A N/A N/A N/A 0.210±0.02 N/A N/A N/A
ENSMUST00000182748 N/A N/A N/A 9.983±0.00 0.715±0.00 0.066±0.00 N/A N/A N/A 0.219±0.00 N/A N/A N/A N/A
ENSMUST00000182820 N/A N/A N/A N/A N/A 0.330±0.00 1.277±0.00 0.851±0.10 0.172±0.01 N/A 0.643±0.16 N/A N/A 2.813±0.42
ENSMUST00000182986 N/A 0.760±0.20 N/A N/A 1.166±0.23 N/A N/A N/A N/A 1.099±0.00 N/A N/A N/A N/A
ENSMUST00000183099 N/A 0.200±0.00 N/A N/A 0.392±0.06 N/A N/A N/A 0.193±0.08 N/A N/A N/A N/A N/A
ENSMUST00000183166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183327 2.197±0.00 N/A N/A N/A N/A N/A 3.610±0.60 N/A 0.218±0.02 N/A N/A N/A 0.223±0.00 N/A
ENSMUST00000183333 N/A 0.230±0.11 N/A 12.029±11.92 0.441±0.09 0.157±0.08 N/A 0.239±0.00 0.134±0.06 0.191±0.06 N/A 0.476±0.21 0.091±0.08 N/A
ENSMUSG00000096870 ENSMUST00000179255 0.372±0.09 N/A 0.120±0.00 1.058±0.60 N/A N/A 0.173±0.00 0.304±0.15 0.051±0.01 0.246±0.00 N/A N/A 0.069±0.01 N/A
ENSMUSG00000100857 ENSMUST00000190317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.735±5.62
ENSMUST00000190908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.888±2.28

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